RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 LAMP5Q9UJQ1 280 aa17.26■□□□□ 0.35
PKNOX1-202ENST00000418336 PPIAL4EA0A075B759 164 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 PPIAL4CA0A0B4J2A2 164 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 PPIAL4DF5H284 164 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 PSMD9O00233 223 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 IFNA2P01563 188 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 PPIAL4FP0DN26 164 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 HNF1AP20823 631 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 LCN2P80188 198 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 LCN1P1Q5VSP4 162 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 KLBQ86Z14 1044 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 RBM4BQ9BQ04 359 aaKnown RBP17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 OR10A2Q9H208 303 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 RGCCQ9H4X1 137 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 NIPAL2Q9H841 368 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 SP140LQ9H930 580 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 MMP26Q9NRE1 261 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 RHBDD3Q9Y3P4 386 aa17.25■□□□□ 0.35
PKNOX1-202ENST00000418336 EBAG9O00559 213 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 FCN3O75636 299 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 LHBP01229 141 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 DCTDP32321 178 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 TIGD6Q17RP2 521 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 ZFP1Q6P2D0 407 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 ZNF841Q6ZN19 808 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 SSX6Q7RTT6 188 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 UBE2FQ969M7 185 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 PPP1R14AQ96A00 147 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 PGAM5Q96HS1 289 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 CNN2Q99439 309 aaKnown RBP17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 PRRG3Q9BZD7 231 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 UFSP2Q9NUQ7 469 aa17.24■□□□□ 0.35
PKNOX1-202ENST00000418336 SLC22A31A6NKX4 558 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 EI24O14681 340 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 MAGEB4O15481 346 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 PHF1O43189 567 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 PCMT1P22061 227 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 SRSF2Q01130 221 aaKnown RBP17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 MFGE8Q08431 387 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 TUSC1Q2TAM9 212 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 ZNF684Q5T5D7 378 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 FAHD2BQ6P2I3 314 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 LYPD2Q6UXB3 125 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 ZNF826PQ6ZT77 177 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 KRT77Q7Z794 578 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 ZNF679Q8IYX0 411 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 MUC20Q8N307 709 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 KLHL36Q8N4N3 616 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 GCSAMQ8N6F7 178 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 C19orf18Q8NEA5 215 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 DEFB108BQ8NET1 73 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 ASB17Q8WXJ9 295 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 ITPKCQ96DU7 683 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 FAHD2AQ96GK7 314 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 MBOAT4Q96T53 435 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 TTTY10Q9BZA0 68 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 TLNRD1Q9H1K6 362 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 RIBC2Q9H4K1 309 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 ENOPH1Q9UHY7 261 aa17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 NOP16Q9Y3C1 178 aaKnown RBP17.23■□□□□ 0.35
PKNOX1-202ENST00000418336 LOC105371242A0A075B767 164 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 ACOD1A6NK06 481 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 CST4P01036 141 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 CFL1P23528 166 aaKnown RBP17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 HTR1FP30939 366 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 PSMB10P40306 273 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 SLC35F2Q8IXU6 374 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 SPERTQ8NA61 448 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 HPSE2Q8WWQ2 592 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 RNF166Q96A37 237 aaPredicted RBP17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 SLC29A1Q99808 456 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 S100A14Q9HCY8 104 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 CLN6Q9NWW5 311 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 CTSZQ9UBR2 303 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 MRM2Q9UI43 246 aaKnown RBP17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 PPIAL4AQ9Y536 164 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 TMEM14AQ9Y6G1 99 aa17.22■□□□□ 0.35
PKNOX1-202ENST00000418336 A0A0G2JMP0 313 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 A0A0U1RQV5 110 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 A0A0X1KG70 313 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 J3QLI3 93 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 ZNF254O75437 659 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 FOXH1O75593 365 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 ZNF12P17014 697 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 EGR1P18146 543 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 CPT2P23786 658 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 ALDH3A2P51648 485 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 CXCR4P61073 352 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 ZNF154Q13106 437 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 GFOD2Q3B7J2 385 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 KRTAP24-1Q3LI83 254 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 KCTD18Q6PI47 426 aaPredicted RBP17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 ZNF322Q6U7Q0 402 aaPredicted RBP17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 C1QL2Q7Z5L3 287 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 GID4Q8IVV7 300 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 OR1M1Q8NGA1 313 aa17.21■□□□□ 0.35
PKNOX1-202ENST00000418336 OR4M2Q8NGB6 313 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms