RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 RAB32Q13637 225 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 LTC4SQ16873 150 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 GGTA1PQ4G0N0 100 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 C6orf132Q5T0Z8 1188 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 KIAA0319Q5VV43 1072 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 PARM1Q6UWI2 310 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 MOB3AQ96BX8 217 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 NXF5Q9H1B4 397 aaKnown RBP9.35□□□□□ -0.91
SATB1-204ENST00000417717 CACFD1Q9UGQ2 172 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 TMEFF2Q9UIK5 374 aaPredicted RBP9.35□□□□□ -0.91
SATB1-204ENST00000417717 PCOLCE2Q9UKZ9 415 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 LAMA4Q16363 1823 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 COL24A1Q17RW2 1714 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 HNRNPA1P09651 372 aaKnown RBP eCLIP9.35□□□□□ -0.91
SATB1-204ENST00000417717 CCL23P55773 120 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 C18orf21Q32NC0 220 aaPredicted RBP9.35□□□□□ -0.91
SATB1-204ENST00000417717 HNRNPA1L2Q32P51 320 aaKnown RBP9.35□□□□□ -0.91
SATB1-204ENST00000417717 FBLN7Q53RD9 439 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 GLIPR1L1Q6UWM5 242 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 PRICKLE2Q7Z3G6 844 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 WDTC1Q8N5D0 677 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 BEND2Q8NDZ0 799 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 GPR32P1Q8NGA4 272 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 DMRTA2Q96SC8 542 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 HSF4Q9ULV5 492 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 PIAS3Q9Y6X2 628 aa9.35□□□□□ -0.91
SATB1-204ENST00000417717 CACNA1SQ13698 1873 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 ANKRD20A5PA0PJZ0 165 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 DHRS7CA6NNS2 312 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 H7C1C5 153 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 CORTO00230 105 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 B4GALT2O60909 372 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 HPRT1P00492 218 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 HPXP02790 462 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 PGA3P0DJD8 388 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 HTR1DP28221 377 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 TMEM33P57088 247 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 PMP22Q01453 160 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 CISD2Q8N5K1 135 aaKnown RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 NMES1Q9C002 83 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 CNTD2Q9H8S5 307 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 MANBALQ9NQG1 85 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 PLEKHB1Q9UF11 243 aaPredicted RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 FBXO4Q9UKT5 387 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 ZFP30Q9Y2G7 519 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 TRBV23OR9-2A0A075B6M9 112 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 CCL15-CCL14A0A0B4J2E2 113 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 TRDCB7Z8K6 153 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 UBE2CO00762 179 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 ST6GAL1P15907 406 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 FCARP24071 287 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 FPR2P25090 351 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 TNFSF10P50591 281 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 CKS1BP61024 79 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 ELAVL3Q14576 367 aaKnown RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 SSX1Q16384 188 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 CCL15Q16663 113 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 PSRC1Q6PGN9 363 aaPredicted RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 DPY19L2P2Q6ZN68 376 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 MEGF9Q9H1U4 602 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 A4GALTQ9NPC4 353 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 RCC2Q9P258 522 aaKnown RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 KIAA1456Q9P272 454 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 ZNF443Q9Y2A4 671 aaPredicted RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 RCL1Q9Y2P8 373 aaKnown RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 NAV1Q8NEY1 1877 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 MYH13Q9UKX3 1938 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 C4AP0C0L4 1744 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 C9orf170A2RU37 121 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 VSTM5A8MXK1 200 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 MSCO60682 206 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 NEURL1O76050 574 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 CFDP00746 253 aaPredicted RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 HBQ1P09105 142 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 PGA4P0DJD7 388 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 PGA5P0DJD9 388 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 EPHA8P29322 1005 aaPredicted RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 MTCP1P56278 107 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 RAB38P57729 211 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 ARF6P62330 175 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 IL24Q13007 206 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 SLC35G1Q2M3R5 365 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 SLC25A35Q3KQZ1 300 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 GLRX5Q86SX6 157 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 NEIL2Q969S2 332 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 ABHD1Q96SE0 405 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 WDR61Q9GZS3 305 aaKnown RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 DMRT3Q9NQL9 472 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 CARHSP1Q9Y2V2 147 aaKnown RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 BAZ2AQ9UIF9 1905 aaKnown RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 SERTM2A0A1B0GWG4 89 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 DNASE2O00115 360 aaPredicted RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 TAPBPO15533 448 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 NUDT3O95989 172 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 WASP42768 502 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 PNLIPRP2P54317 469 aa9.34□□□□□ -0.91
SATB1-204ENST00000417717 ATP5IP56385 69 aaPredicted RBP9.34□□□□□ -0.91
SATB1-204ENST00000417717 SELENOVP59797 346 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms