RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 H0YHG0 523 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 CDC14BO60729 498 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 IGHV2-5P01817 119 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 ANXA2P07355 339 aaKnown RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 SBK2P0C263 348 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 MDKP21741 143 aaPredicted RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 HTR1FP30939 366 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 RGS6P49758 472 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 MMP15P51511 669 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 ZNF121P58317 390 aaPredicted RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 SNRPGP62308 76 aaKnown RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 CCL8P80075 99 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 ZNF92Q03936 586 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 GK2Q14410 553 aaPredicted RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 UNQ6126/PRO20091Q6UXV3 157 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 RBMS3Q6XE24 437 aaKnown RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 Q6ZR03 302 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 PLEKHG7Q6ZR37 379 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 USP51Q70EK9 711 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 KRT77Q7Z794 578 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 ZNF454Q8N9F8 522 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 BHLHE23Q8NDY6 225 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 ZNF555Q8NEP9 628 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 PPP1R14AQ96A00 147 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 HAVCR1Q96D42 359 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 ZNF48Q96MX3 618 aaPredicted RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 WARS2Q9UGM6 360 aaKnown RBP15.11■□□□□ 0.01
VCP-202ENST00000417448 LRP12Q9Y561 859 aa15.11■□□□□ 0.01
VCP-202ENST00000417448 RYR3Q15413 4870 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 C17orf100A8MU93 164 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 SLC16A6O15403 523 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 RNASE1P07998 156 aaKnown RBP15.1■□□□□ 0.01
VCP-202ENST00000417448 SLC15A1P46059 708 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 ZNF81P51508 661 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 CXCR4P61073 352 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 GRB2P62993 217 aaKnown RBP15.1■□□□□ 0.01
VCP-202ENST00000417448 SMN1Q16637 294 aaKnown RBP15.1■□□□□ 0.01
VCP-202ENST00000417448 GFOD2Q3B7J2 385 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 DRAM2Q6UX65 266 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 BCL6BQ8N143 479 aaPredicted RBP15.1■□□□□ 0.01
VCP-202ENST00000417448 OR10H4Q8NGA5 316 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 OR5L1Q8NGL2 311 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 RHOXF1Q8NHV9 184 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 SNX33Q8WV41 574 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 TRUB1Q8WWH5 349 aaKnown RBP15.1■□□□□ 0.01
VCP-202ENST00000417448 RAB39BQ96DA2 213 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 RNFT2Q96EX2 444 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 RNPEPL1Q9HAU8 725 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 IKZF2Q9UKS7 526 aa15.1■□□□□ 0.01
VCP-202ENST00000417448 IGHV3-64DA0A0J9YX35 117 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 H0YL77 283 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 IGHV1-46P01743 117 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 ATP6V1E1P36543 226 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 ADARB1P78563 741 aaKnown RBP15.09■□□□□ 0.01
VCP-202ENST00000417448 IL5RAQ01344 420 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 ZNF322Q6U7Q0 402 aaPredicted RBP15.09■□□□□ 0.01
VCP-202ENST00000417448 FBXW12Q6X9E4 464 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 DHRSXQ8N5I4 330 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 PACRGLQ8N7B6 248 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 APH1BQ8WW43 257 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 SGK3Q96BR1 496 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 ZMAT3Q9HA38 289 aaKnown RBP15.09■□□□□ 0.01
VCP-202ENST00000417448 CLN6Q9NWW5 311 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 HAO2Q9NYQ3 351 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 ZNF69Q9UC07 566 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 TANC2Q9HCD6 1990 aa15.09■□□□□ 0.01
VCP-202ENST00000417448 A0A1W2PQL4 384 aaPredicted RBP15.08■□□□□ 0
VCP-202ENST00000417448 ZNF670-ZNF695F2Z2N8 137 aa15.08■□□□□ 0
VCP-202ENST00000417448 TPD52L2O43399 206 aaKnown RBP15.08■□□□□ 0
VCP-202ENST00000417448 GNAO1P09471 354 aa15.08■□□□□ 0
VCP-202ENST00000417448 RAC2P15153 192 aa15.08■□□□□ 0
VCP-202ENST00000417448 KITLGP21583 273 aa15.08■□□□□ 0
VCP-202ENST00000417448 BAMBIQ13145 260 aa15.08■□□□□ 0
VCP-202ENST00000417448 PRSS45Q7RTY3 260 aa15.08■□□□□ 0
VCP-202ENST00000417448 CNIH3Q8TBE1 160 aa15.08■□□□□ 0
VCP-202ENST00000417448 PGAM5Q96HS1 289 aa15.08■□□□□ 0
VCP-202ENST00000417448 OR8B4Q96RC9 309 aa15.08■□□□□ 0
VCP-202ENST00000417448 CACNG2Q9Y698 323 aa15.08■□□□□ 0
VCP-202ENST00000417448 PLSCR5A0PG75 271 aa15.07■□□□□ 0
VCP-202ENST00000417448 WBP4O75554 376 aaKnown RBP15.07■□□□□ 0
VCP-202ENST00000417448 HLA-DPB1P04440 258 aa15.07■□□□□ 0
VCP-202ENST00000417448 OMGP23515 440 aa15.07■□□□□ 0
VCP-202ENST00000417448 GATA3P23771 443 aa15.07■□□□□ 0
VCP-202ENST00000417448 MTNR1AP48039 350 aa15.07■□□□□ 0
VCP-202ENST00000417448 MFGE8Q08431 387 aaPredicted RBP15.07■□□□□ 0
VCP-202ENST00000417448 MALLQ13021 153 aa15.07■□□□□ 0
VCP-202ENST00000417448 KLF17Q5JT82 389 aaPredicted RBP15.07■□□□□ 0
VCP-202ENST00000417448 ZNF691Q5VV52 312 aa15.07■□□□□ 0
VCP-202ENST00000417448 PGAP1Q75T13 922 aa15.07■□□□□ 0
VCP-202ENST00000417448 MRPL21Q7Z2W9 205 aaKnown RBP15.07■□□□□ 0
VCP-202ENST00000417448 C1orf174Q8IYL3 243 aa15.07■□□□□ 0
VCP-202ENST00000417448 OR2Z1Q8NG97 314 aa15.07■□□□□ 0
VCP-202ENST00000417448 RFKQ969G6 155 aa15.07■□□□□ 0
VCP-202ENST00000417448 LGALS12Q96DT0 336 aa15.07■□□□□ 0
VCP-202ENST00000417448 COG8Q96MW5 612 aa15.07■□□□□ 0
VCP-202ENST00000417448 RDH12Q96NR8 316 aa15.07■□□□□ 0
VCP-202ENST00000417448 PPP1R3EQ9H7J1 279 aa15.07■□□□□ 0
VCP-202ENST00000417448 MRM2Q9UI43 246 aaKnown RBP15.07■□□□□ 0
VCP-202ENST00000417448 GPR160Q9UJ42 338 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms