RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 OR2V2Q96R30 315 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 ZNF275Q9NSD4 429 aaPredicted RBP19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 OR52A1Q9UKL2 312 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 ITPR3Q14573 2671 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 MED13LQ71F56 2210 aa19.58■□□□□ 0.73
SMARCB1-205ENST00000417137 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 SRSF10O75494 262 aaKnown RBP19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 PNPP00491 289 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 ATP6V1B1P15313 513 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 USF1P22415 310 aaPredicted RBP19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 GPR6P46095 362 aaPredicted RBP19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 AQP4P55087 323 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 LOXL1Q08397 574 aaPredicted RBP19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 GALEQ14376 348 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 SMN1Q16637 294 aaKnown RBP19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 CDONQ4KMG0 1287 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 CELF2-AS1Q8N7Q2 184 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 OR10AD1Q8NGE0 317 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 ITLN1Q8WWA0 313 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 CCL17Q92583 94 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 BPESC1Q9GZL8 116 aa19.58■□□□□ 0.72
SMARCB1-205ENST00000417137 H0YL77 283 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 IFNL4K9M1U5 179 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 MLNRO43193 412 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 PPIHO43447 177 aaKnown RBP19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 MTRF1O75570 445 aaKnown RBP19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 RP2O75695 350 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 IGHA1P01876 353 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 HLA-DPB1P04440 258 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 GNAO1P09471 354 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 GNALP38405 381 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 MAP2K3P46734 347 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 HSPA13P48723 471 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 MFGE8Q08431 387 aaPredicted RBP19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 OR8B8Q15620 311 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 TP53I3Q53FA7 332 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 ELMOD2Q8IZ81 293 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 OR52I1Q8NGK6 324 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 OR51E1Q8TCB6 317 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 TIMD4Q96H15 378 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 MEGF10Q96KG7 1140 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 LYZL4Q96KX0 146 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 G6PC2Q9NQR9 355 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 PPP1R3CQ9UQK1 317 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 MYRFQ9Y2G1 1151 aa19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 RRP15Q9Y3B9 282 aaKnown RBP19.57■□□□□ 0.72
SMARCB1-205ENST00000417137 CLDN25C9JDP6 229 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 F5H5P2 479 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 FAM20BO75063 409 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 DCKP27707 260 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 C6orf52Q5T4I8 152 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 PEG10Q86TG7 708 aaKnown RBP19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 BIVMQ86UB2 503 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 LHFPL3Q86UP9 236 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 ADAT1Q9BUB4 502 aaKnown RBP19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 ALG8Q9BVK2 526 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 ABCB9Q9NP78 766 aa19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 FGF20Q9NP95 211 aaPredicted RBP19.56■□□□□ 0.72
SMARCB1-205ENST00000417137 J3QLW9 94 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 TTRP02766 147 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 ZNF19P17023 458 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 OR12D2P58182 307 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 MED21Q13503 144 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 CATSPERDQ86XM0 798 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 SYS1Q8N2H4 156 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 OR8S1Q8NH09 359 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 RORBQ92753 470 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 RAB1CQ92928 201 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 ERGIC1Q969X5 290 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 PPP1R14AQ96A00 147 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 GPR84Q9NQS5 396 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 C14orf119Q9NWQ9 140 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 ERVK13-1Q9NX77 482 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 MPC1Q9Y5U8 109 aa19.55■□□□□ 0.72
SMARCB1-205ENST00000417137 CD200P41217 278 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 CSNK2BP67870 215 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 RIPPLY1Q0D2K3 151 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 SPRNQ5BIV9 151 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 PLPP7Q8NBV4 271 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 SEMA6DQ8NFY4 1073 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 FBLIM1Q8WUP2 373 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 FAM71F1Q96KD3 344 aaPredicted RBP19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 C4orf36Q96KX1 117 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 PAPOLGQ9BWT3 736 aaKnown RBP19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 JAM3Q9BX67 310 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 GCM1Q9NP62 436 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 TMEM106BQ9NUM4 274 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 ACOXLQ9NUZ1 547 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 CHCHD3Q9NX63 227 aaKnown RBP19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 TREM2Q9NZC2 230 aa19.54■□□□□ 0.72
SMARCB1-205ENST00000417137 A0A096LNT2 108 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 EFCAB10A6NFE3 127 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 ANXA2P2A6NMY6 339 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 RRP9O43818 475 aaKnown RBP19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 CST4P01036 141 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 IGLV3-1P01715 115 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 CHN2P52757 468 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 MRPL28Q13084 256 aaKnown RBP19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 ZBTB37Q5TC79 503 aa19.53■□□□□ 0.72
SMARCB1-205ENST00000417137 IZUMO2Q6UXV1 221 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms