RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NTNG2Q96CW9 530 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 C2orf50Q96LR7 162 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 SLC35B3Q9H1N7 401 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 NELFAQ9H3P2 528 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 RAB18Q9NP72 206 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM184BQ9Y519 407 aaPredicted RBP13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 DMDP11532 3685 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 NUP210LQ5VU65 1888 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 FREM2Q5SZK8 3169 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 A0A087WUJ7 227 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR5H15A6NDH6 313 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR5H1A6NKK0 313 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 SDCBPO00560 298 aaPredicted RBP13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 RENP00797 406 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 IGKV1D-16P01601 117 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 SLC35G6P0C7Q6 338 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 LTBRP36941 435 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 TAGLN2P37802 199 aaKnown RBP13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 KIR2DL1P43626 348 aaPredicted RBP13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 SLC17A1Q14916 467 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 IAH1Q2TAA2 248 aaPredicted RBP13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 MESTQ5EB52 335 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 COX15Q7KZN9 410 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 MFSD9Q8NBP5 474 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM52Q8NDY8 209 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 TERB2Q8NHR7 220 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 AQP3Q92482 292 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM230Q96A57 120 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 BSCL2Q96G97 398 aaPredicted RBP13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 SLC26A1Q9H2B4 701 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 UBQLN4Q9NRR5 601 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 PIAS3Q9Y6X2 628 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 TAAR5O14804 337 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 SOX15O60248 233 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 JTBO76095 146 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 SFT2D2O95562 160 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 CHATP28329 748 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 PEBP1P30086 187 aaKnown RBP13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 EGR3Q06889 387 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 ENPP2Q13822 863 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM268Q5VZI3 342 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 HSD17B11Q8NBQ5 300 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR2L8Q8NGY9 312 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR10G6Q8NH81 332 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 RARRES2Q99969 163 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 S1PR5Q9H228 398 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 DAPP1Q9UN19 280 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 TGIF2-C20orf24A0A0A6YYL0 155 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 GIMD1P0DJR0 217 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 C5AR1P21730 350 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 GLRA1P23415 457 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 CTHP32929 405 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 RGS19P49795 217 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 SLC26A5P58743 744 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 Q8WTZ3 238 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 PMM1Q92871 262 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 NEU1Q99519 415 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 FAM86C1Q9NVL1 165 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 FREM3P0C091 2139 aa13.1□□□□□ -0.31
NCKIPSD-204ENST00000416649 A0A1B0GWJ7 208 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 IGFALSP35858 605 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 SLC25A1P53007 311 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 RAB1AP62820 205 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 TOMM20Q15388 145 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 UBE2V2Q15819 145 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM52BQ4KMG9 183 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF542PQ5EBM4 170 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 FHL5Q5TD97 284 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 PTCRAQ6ISU1 281 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 LINC00114Q6XXX2 140 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 HOGA1Q86XE5 327 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST3H2BBQ8N257 126 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 PNLDC1Q8NA58 520 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 APCDD1LQ8NCL9 501 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR10AD1Q8NGE0 317 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 OTOSQ8NHW6 89 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 ERGIC1Q969X5 290 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 ELSPBP1Q96BH3 223 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 SPACA5Q96QH8 159 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 PTGES2Q9H7Z7 377 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 CNTD2Q9H8S5 307 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 LUZP4Q9P127 313 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 DNAJB11Q9UBS4 358 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 RCL1Q9Y2P8 373 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 EMC9Q9Y3B6 208 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 CABIN1Q9Y6J0 2220 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 PPP1CCP36873 323 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 RPL18Q07020 188 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 DPTQ07507 201 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 CCL4L1Q8NHW4 92 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 FAM213BQ8TBF2 198 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 PACRGQ96M98 296 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 GNRHR2Q96P88 292 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR8B4Q96RC9 309 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 STACQ99469 402 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 CDCA3Q99618 268 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 LPAR4Q99677 370 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 C2orf88Q9BSF0 95 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 HDAC8Q9BY41 377 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms