RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 PLPP7Q8NBV4 271 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 OR4C15Q8NGM1 316 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 OR2T29Q8NH02 315 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 OR8S1Q8NH09 359 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 LINC01006Q8NI28 216 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 CCDC124Q96CT7 223 aaKnown RBP12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 SLC7A6OSQ96CW6 309 aaPredicted RBP12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 OR52D1Q9H346 318 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 YY1AP1Q9H869 796 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 REEP1Q9H902 201 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 ONECUT1Q9UBC0 465 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 N6AMT1Q9Y5N5 214 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 A0A0U1RQK1 487 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 A0A1B0GWJ7 208 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 BHLHE40O14503 412 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 DVL1O14640 695 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 CCNB2O95067 398 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 FBP1P09467 338 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 MMP9P14780 707 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 EEF1B2P24534 225 aaKnown RBP12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 FXYD6P3P58550 94 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 C2orf68Q2NKX9 166 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 ASPHD2Q6ICH7 369 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 PGBD2Q6P3X8 592 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 SDR9C7Q8NEX9 313 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 FAM110DQ8TAY7 271 aaPredicted RBP12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 KCNG2Q9UJ96 466 aa12.89□□□□□ -0.35
SBDSP1-201ENST00000415772 A0A1B0GVI7 797 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 ANKRD61A6NGH8 418 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 ANKRD30BLA7E2S9 258 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 PAHP00439 452 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 HIST1H1CP16403 213 aaKnown RBP12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 IER3P46695 156 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 MICAQ29983 383 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 ZNF770Q6IQ21 691 aaPredicted RBP12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 VMO1Q7Z5L0 202 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 LDLRAD3Q86YD5 345 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 C1QL4Q86Z23 238 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 PROKR2Q8NFJ6 384 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 OR52L1Q8NGH7 329 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 OR2AE1Q8NHA4 323 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 CLPTM1LQ96KA5 538 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 COPS4Q9BT78 406 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 CHID1Q9BWS9 393 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 SIRPDQ9H106 197 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 FN3KQ9H479 309 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 OPA3Q9H6K4 179 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 CNTD2Q9H8S5 307 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 SMURF1Q9HCE7 757 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 IL20Q9NYY1 176 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 MRPL15Q9P015 296 aaKnown RBP12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 CYB5R1Q9UHQ9 305 aa12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 SAMHD1Q9Y3Z3 626 aaKnown RBP12.88□□□□□ -0.35
SBDSP1-201ENST00000415772 TRRAPQ9Y4A5 3859 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 DHRS12A0PJE2 317 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 ARRDC5A6NEK1 342 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 CLPXO76031 633 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 CSF1P09603 554 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 HOXA4Q00056 320 aaPredicted RBP12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 ZNF92Q03936 586 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 POU4F2Q12837 409 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 FLOT2Q14254 428 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 MICBQ29980 383 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 C11orf91Q3C1V1 193 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 CDONQ4KMG0 1287 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 DRAM2Q6UX65 266 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 RASSF6Q6ZTQ3 369 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 RHOUQ7L0Q8 258 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 SLC36A1Q7Z2H8 476 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 ADGRG5Q8IZF4 528 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 DGCR6LQ9BY27 220 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 BAIAP2Q9UQB8 552 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 KPTNQ9Y664 436 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 CDH10Q9Y6N8 788 aa12.87□□□□□ -0.35
SBDSP1-201ENST00000415772 IGHV3OR15-7A0A075B7D8 119 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 GSC2O15499 205 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 TBX1O43435 398 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 NDUFB3O43676 98 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 TSPAN15O95858 294 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 CST1P01037 141 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 PROK1P58294 105 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 GUCA2AQ02747 115 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 SNAI3Q3KNW1 292 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 KRTAP27-1Q3LI81 207 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 SLC35F1Q5T1Q4 408 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 CD300LDQ6UXZ3 194 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 ZNF826PQ6ZT77 177 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 ZBTB46Q86UZ6 589 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 NPRL2Q8WTW4 380 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 CANT1Q8WVQ1 401 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 CENPMQ9NSP4 180 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 RPUSD1Q9UJJ7 312 aaKnown RBP12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 POMPQ9Y244 141 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 TGP01266 2768 aa12.86□□□□□ -0.35
SBDSP1-201ENST00000415772 TCRBV3S1A0A5B6 114 aa12.85□□□□□ -0.35
SBDSP1-201ENST00000415772 XRCC2O43543 280 aa12.85□□□□□ -0.35
SBDSP1-201ENST00000415772 GASTP01350 101 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms