RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 MYNNQ9NPC7 610 aa18.21■□□□□ 0.51
AP1S3-205ENST00000415298 TMEM56-RWDD3S4R434 201 aa18.21■□□□□ 0.51
AP1S3-205ENST00000415298 GXYLT2A0PJZ3 443 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 IFNW1P05000 195 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 PEBP1P30086 187 aaKnown RBP18.2■□□□□ 0.5
AP1S3-205ENST00000415298 PSG6Q00889 435 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 COMMD1Q8N668 190 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 PLPP5Q8NEB5 264 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 ABHD4Q8TB40 342 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 TOMM40LQ969M1 308 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 C16orf58Q96GQ5 468 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 SEC22AQ96IW7 307 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 MIEN1Q9BRT3 115 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 RXFP3Q9NSD7 469 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 RP1P56715 2156 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 VSTM5A8MXK1 200 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 HPRT1P00492 218 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 AQP2P41181 271 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 POLR2HP52434 150 aaKnown RBP18.2■□□□□ 0.5
AP1S3-205ENST00000415298 TMEM33P57088 247 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 CDK5Q00535 292 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 C17orf67Q0P5P2 114 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 ARL6IP1Q15041 203 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 LRRC70Q7Z2Q7 622 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 GALNT16Q8N428 558 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 LYPD6BQ8NI32 183 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 TECTBQ96PL2 329 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 KCNJ16Q9NPI9 418 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 FBXW2Q9UKT8 454 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 ZNF281Q9Y2X9 895 aa18.2■□□□□ 0.5
AP1S3-205ENST00000415298 POLR3KQ9Y2Y1 108 aaPredicted RBP18.2■□□□□ 0.5
AP1S3-205ENST00000415298 A0A087WWC5 75 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 TRAV1-2A0A0B4J238 106 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 SRPX2O60687 465 aaPredicted RBP18.19■□□□□ 0.5
AP1S3-205ENST00000415298 TOMM40O96008 361 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 FGF5P12034 268 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 CD22P20273 847 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 TACR1P25103 407 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 PLA2G2CQ5R387 149 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 AWAT2Q6E213 333 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 ZNF343Q6P1L6 599 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 OR4C16Q8NGL9 310 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 OR13C5Q8NGS8 318 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 OR13C2Q8NGS9 318 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 OR10G6Q8NH81 332 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 LOXL4Q96JB6 756 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 TBL1XR1Q9BZK7 514 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 TGIF2-C20orf24A0A0A6YYL0 155 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 F6UZH7 168 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 SLC2A5P22732 501 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 SULT1A2P50226 295 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 TAS2R19P59542 299 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 UBE2KP61086 200 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 KLHL24Q6TFL4 600 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 C17orf82Q86X59 251 aaPredicted RBP18.19■□□□□ 0.5
AP1S3-205ENST00000415298 OR2A1Q8NGT9 310 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 VAX2Q9UIW0 290 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 HEATR5BQ9P2D3 2071 aa18.19■□□□□ 0.5
AP1S3-205ENST00000415298 FFAR1O14842 300 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 PRICKLE3O43900 615 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-205ENST00000415298 ERVFRD-1P60508 538 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 PPP1CAP62136 330 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 CHIT1Q13231 466 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 CPSF6Q16630 551 aaKnown RBP eCLIP18.18■□□□□ 0.5
AP1S3-205ENST00000415298 GBGT1Q8N5D6 347 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 BBS1Q8NFJ9 593 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 C15orf40Q8WUR7 153 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 SAMD8Q96LT4 415 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 ISG20L2Q9H9L3 353 aaKnown RBP18.18■□□□□ 0.5
AP1S3-205ENST00000415298 RNF150Q9ULK6 438 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 OTOGLQ3ZCN5 2332 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 LOC100509620A0A075B734 347 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 ELAVL4P26378 380 aaKnown RBP18.18■□□□□ 0.5
AP1S3-205ENST00000415298 HSD3B2P26439 372 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-205ENST00000415298 PODNL1Q6PEZ8 512 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 CASTOR1Q8WTX7 329 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 SMPDL3AQ92484 453 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 POFUT1Q9H488 388 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 ADGRL4Q9HBW9 690 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 PLSCR4Q9NRQ2 329 aa18.18■□□□□ 0.5
AP1S3-205ENST00000415298 UNC13CQ8NB66 2214 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 NUDT21O43809 227 aaKnown RBP18.17■□□□□ 0.5
AP1S3-205ENST00000415298 LRP3O75074 770 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 SLC35G6P0C7Q6 338 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 FASLGP48023 281 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 OCIAD2Q56VL3 154 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 ARL9Q6T311 187 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 RNF175Q8N4F7 328 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 OR1P1Q8NH06 330 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 ABHD3Q8WU67 409 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 JSRP1Q96MG2 331 aaPredicted RBP18.17■□□□□ 0.5
AP1S3-205ENST00000415298 NELFAQ9H3P2 528 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 PDE7BQ9NP56 450 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 MKKSQ9NPJ1 570 aaPredicted RBP18.17■□□□□ 0.5
AP1S3-205ENST00000415298 TRBC2A0A5B9 178 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 ZNF727A8MUV8 499 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 CD34P28906 385 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 SNCAP37840 140 aa18.17■□□□□ 0.5
AP1S3-205ENST00000415298 PRRX1P54821 245 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms