RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MEX3DQ86XN8 651 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 NAXDQ8IW45 347 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 BOD1L2Q8IYS8 172 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 GABRG1Q8N1C3 465 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 Q8N402 240 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 FAM89BQ8N5H3 189 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 EID2Q8N6I1 236 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR4M1Q8NGD0 313 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR52B6Q8NGF0 335 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR5T3Q8NGG3 340 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR1L4Q8NGR5 311 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR13C3Q8NGS6 347 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR4C3Q8NH37 302 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 WDR36Q8NI36 951 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 VANGL1Q8TAA9 524 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 M1APQ8TC57 530 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAET1EQ8TD07 263 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF431Q8TF32 576 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 C15orf40Q8WUR7 153 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 EEF1AKMT1Q8WVE0 214 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 UFD1Q92890 307 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 UCN3Q969E3 161 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 NXPE2Q96DL1 559 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PCED1BQ96HM7 432 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 DIRAS2Q96HU8 199 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 B3GALT6Q96L58 329 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ERMAPQ96PL5 475 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 NEDD4LQ96PU5 975 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PKMYT1Q99640 499 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 VGLL1Q99990 258 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 P2RY13Q9BPV8 354 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 POLR2J2Q9GZM3 115 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 SHARPINQ9H0F6 387 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 MED28Q9H204 178 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC38A1Q9H2H9 487 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 IKZF5Q9H5V7 419 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 NARFLQ9H6Q4 476 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PDFQ9HBH1 243 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ABCB9Q9NP78 766 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 FGF20Q9NP95 211 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PLSCR3Q9NRY6 295 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 TXNL4BQ9NX01 149 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 GPR83Q9NYM4 423 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PLEK2Q9NYT0 353 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 MRM2Q9UI43 246 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 SCP2D1Q9UJQ7 156 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PITPNC1Q9UKF7 332 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 SPATA2Q9UM82 520 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 EXOSC1Q9Y3B2 195 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF175Q9Y473 711 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 HSPB11Q9Y547 144 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 NPTNQ9Y639 398 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ALG5Q9Y673 324 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 MRPS18BQ9Y676 258 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ENPP4Q9Y6X5 453 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 V9GYQ6 96 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 GBF1Q92538 1859 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SHROOM3Q8TF72 1996 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 NUP205Q92621 2012 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 KCNE1BA0A087WTH5 132 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MEIKINA0A087WXM9 373 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 TRBV5-4A0A0C4DH59 114 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 GLYATL1P3A0A0U1RQE8 302 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MYBPHLA2RUH7 354 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MTMR11A4FU01 709 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 NAP1L6A6NFF2 107 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANKUB1A6NFN9 424 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PCP4L1A6NKN8 68 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 A8MXK9 166 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRSS46E5RG02 174 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 LRRN3E7EW58 273 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 I3L521 148 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 BTN3A3O00478 584 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 CLDN5O00501 218 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 FAAHO00519 579 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF749O43361 778 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 CHP2O43745 196 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 GMDSO60547 372 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PSIP1O75475 530 aaKnown RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 GADD45GO95257 159 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SNAPINO95295 136 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 VTNP04004 478 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC35E2P0CK97 266 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 GIMD1P0DJR0 217 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MPC1LP0DKB6 136 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SULT1A3P0DMM9 295 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SULT1A4P0DMN0 295 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 IGHV4-31P0DP07 118 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 CBR1P16152 277 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SDC1P18827 310 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PSMB5P28074 263 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 LAP3P28838 519 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 HSD11B1P28845 292 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 RBMS1P29558 406 aaKnown RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PPP2R1BP30154 601 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 CFHR2P36980 270 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 NKX2-1P43699 371 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 IDH2P48735 452 aaKnown RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 TGM4P49221 684 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MLF1P58340 268 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms