RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CHRNB4P30926 498 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 ETV6P41212 452 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 GSK3AP49840 483 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 ASCL1P50553 236 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 PSMD7P51665 324 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 ADORA2A-AS1P86434 159 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 FAM3AP98173 230 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 SPOCK1Q08629 439 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 MALLQ13021 153 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 GK2Q14410 553 aaPredicted RBP5.74□□□□□ -1.49
VPS41-204ENST00000413141 PPA1Q15181 289 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 TAB1Q15750 504 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 C3orf36Q3SXR2 165 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 HES5Q5TA89 166 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 ZBTB37Q5TC79 503 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 DDI2Q5TDH0 399 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 GLT8D1Q68CQ7 371 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 MZT2AQ6P582 158 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 SEZ6L2Q6UXD5 910 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 UTS2BQ765I0 119 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 MRPL21Q7Z2W9 205 aaKnown RBP5.74□□□□□ -1.49
VPS41-204ENST00000413141 CCDC190Q86UF4 302 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 FJX1Q86VR8 437 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 LYPD6Q86Y78 171 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 OR5AS1Q8N127 324 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 STEAP2Q8NFT2 490 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 TRMT10AQ8TBZ6 339 aaKnown RBP5.74□□□□□ -1.49
VPS41-204ENST00000413141 LGALS14Q8TCE9 139 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 UBASH3BQ8TF42 649 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 S100ZQ8WXG8 99 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 CCDC120Q96HB5 630 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 CEP19Q96LK0 163 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 C1QTNF6Q9BXI9 259 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 WDR12Q9GZL7 423 aaKnown RBP5.74□□□□□ -1.49
VPS41-204ENST00000413141 OR10A4Q9H209 315 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 MIXL1Q9H2W2 232 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 POFUT1Q9H488 388 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 LIN7BQ9HAP6 207 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 HMG20AQ9NP66 347 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 ABCB9Q9NP78 766 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 TMEM138Q9NPI0 162 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 TBCCD1Q9NVR7 557 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 PTTG3PQ9NZH4 202 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 NPAP1Q9NZP6 1156 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 ABRACLQ9P1F3 81 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 COMMD3Q9UBI1 195 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 STEAP1Q9UHE8 339 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 RHBDD3Q9Y3P4 386 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 IGSF10Q6WRI0 2623 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 ZGRF1Q86YA3 2104 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 SMG1Q96Q15 3661 aaKnown RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 IGHV2OR16-5A0A0B4J2B6 119 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 IGKV1-9A0A0C4DH69 117 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 ZNF816-ZNF321PA0A0X1KG74 233 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 MEGF11A6BM72 1044 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 FAM90A27PA6NNH2 459 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 C16orf97H3BN30 126 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 SLC17A2O00624 439 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 HPGDSO60760 199 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 PAHP00439 452 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 ERCC1P07992 297 aaPredicted RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 FAM157BP0CG42 384 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 CALCBP10092 127 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 CD37P11049 281 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 ZNF35P13682 527 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 AZGP1P25311 298 aaKnown RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 CALCRP30988 508 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 TNFSF8P32971 234 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 MAP2K3P46734 347 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 UQCRFS1P47985 274 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 ZNF83P51522 516 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 CLDN12P56749 244 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 SCAND1P57086 179 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 NAAAQ02083 359 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 RIPPLY1Q0D2K3 151 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 HLXQ14774 488 aaPredicted RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 ZNF846Q147U1 533 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 CNN3Q15417 329 aaKnown RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 UBE2V2Q15819 145 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 RAB11BQ15907 218 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 FBXL19-AS1Q494R0 122 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 SPATA46Q5T0L3 261 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 TMEM42Q69YG0 159 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 FAM166AQ6J272 317 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 JAGN1Q8N5M9 183 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 SAMD12Q8N8I0 201 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 GALNT11Q8NCW6 608 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 OR56B2PQ8NGI1 322 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 OR52N4Q8NGI2 321 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 OR6M1Q8NGM8 313 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 OR5H6Q8NGV6 325 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 ZNF671Q8TAW3 534 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 SSC4DQ8WTU2 575 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 ZFAND2BQ8WV99 257 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 MUCL1Q96DR8 90 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 NKX3-1Q99801 234 aaPredicted RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 USB1Q9BQ65 265 aaKnown RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 MRI1Q9BV20 369 aa5.73□□□□□ -1.49
VPS41-204ENST00000413141 REPIN1Q9BWE0 567 aaKnown RBP5.73□□□□□ -1.49
VPS41-204ENST00000413141 OR51B6Q9H340 312 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms