RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 LIPNQ5VXI9 398 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 LAIR2Q6ISS4 152 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 CLEC9AQ6UXN8 241 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 DHRSXQ8N5I4 330 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 CYGBQ8WWM9 190 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 DVL3Q92997 716 aaPredicted RBP11.12□□□□□ -0.63
HDAC8-210ENST00000412342 Q96MT0 163 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 SLC22A4Q9H015 551 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 PPP1R3EQ9H7J1 279 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 MOB1AQ9H8S9 216 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 GCM1Q9NP62 436 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 AMBNQ9NP70 447 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 TREM2Q9NZC2 230 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 ZNF391Q9UJN7 358 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 MYRFQ9Y2G1 1151 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.63
HDAC8-210ENST00000412342 METTL15A6NJ78 407 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 SNTNA6NMZ2 147 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 LOC110117498-PIK3R3F6TDL0 507 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 H0YAE9 185 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 PPIHO43447 177 aaKnown RBP11.11□□□□□ -0.63
HDAC8-210ENST00000412342 KRT8P05787 483 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 IGHV4-31P0DP07 118 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 TNFRSF1AP19438 455 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 ATP6V1E1P36543 226 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 CAPGP40121 348 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 PMELP40967 661 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 IL5RAQ01344 420 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 IL18R1Q13478 541 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 Q6ZSR3 168 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 ELMOD2Q8IZ81 293 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 CELF2-AS1Q8N7Q2 184 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 PLPP7Q8NBV4 271 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 CNIH3Q8TBE1 160 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 FBLIM1Q8WUP2 373 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 CCL17Q92583 94 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 RORBQ92753 470 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 TFAP2CQ92754 450 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 C1orf159Q96HA4 380 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 ADAT1Q9BUB4 502 aaKnown RBP11.11□□□□□ -0.63
HDAC8-210ENST00000412342 TMEM106BQ9NUM4 274 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 ACOXLQ9NUZ1 547 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 OR52A1Q9UKL2 312 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 WIPI2Q9Y4P8 454 aa11.11□□□□□ -0.63
HDAC8-210ENST00000412342 FN1P02751 2386 aaKnown RBP11.1□□□□□ -0.63
HDAC8-210ENST00000412342 LOC100289279A0A1B0GTE1 492 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 A0A1B0GTI1 187 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 CLDN25C9JDP6 229 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 H0YJX3 145 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 CD5LO43866 347 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 GMDSO60547 372 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 FAM20BO75063 409 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 SRP9P49458 86 aaKnown RBP11.1□□□□□ -0.63
HDAC8-210ENST00000412342 CHN2P52757 468 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 RAB40BQ12829 278 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 RIPK1Q13546 671 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 ZNF181Q2M3W8 571 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 TP53I3Q53FA7 332 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 AVPI1Q5T686 147 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 PRAMEF6Q5VXH4 476 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 Q71RC1 249 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-210ENST00000412342 WDR86Q86TI4 376 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 CATSPERDQ86XM0 798 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 PRSS35Q8N3Z0 413 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 ACBD7Q8N6N7 88 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 YIPF7Q8N8F6 280 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 CSNK2A3Q8NEV1 391 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 OR52I1Q8NGK6 324 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 CLDND2Q8NHS1 167 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 ZNF420Q8TAQ5 688 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-210ENST00000412342 OR51E1Q8TCB6 317 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 JAM3Q9BX67 310 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 FGF23Q9GZV9 251 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-210ENST00000412342 FGF20Q9NP95 211 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-210ENST00000412342 GPR84Q9NQS5 396 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 PPP1R3CQ9UQK1 317 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 SLC22A13Q9Y226 551 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 RHBDD3Q9Y3P4 386 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 RPL36Q9Y3U8 105 aaKnown RBP11.1□□□□□ -0.63
HDAC8-210ENST00000412342 PCDHGB1Q9Y5G3 927 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 SNX5Q9Y5X3 404 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 HSPE1-MOB4S4R3N1 261 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 MALRD1Q5VYJ5 2156 aa11.1□□□□□ -0.63
HDAC8-210ENST00000412342 IGHV3-64DA0A0J9YX35 117 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 TMEM178BH3BS89 294 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 RPP14O95059 124 aaKnown RBP11.09□□□□□ -0.63
HDAC8-210ENST00000412342 CST4P01036 141 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 CCL1P22362 96 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 KIR3DL2P43630 455 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 AQP4P55087 323 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 OR12D2P58182 307 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 LMO4P61968 165 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 MVKQ03426 396 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 SLC3A1Q07837 685 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 OR8G1Q15617 311 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 MPPED2Q15777 294 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 WDR38Q5JTN6 314 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 BCL2L15Q5TBC7 163 aa11.09□□□□□ -0.63
HDAC8-210ENST00000412342 MOGAT3Q86VF5 341 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms