RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 PCK2Q16822 640 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 WDR38Q5JTN6 314 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GLYATQ6IB77 296 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 C8orf82Q6P1X6 216 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 METAP1DQ6UB28 335 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 C11orf53Q8IXP5 236 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 CMTM4Q8IZR5 234 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 FAM86B1Q8N7N1 296 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OR8S1Q8NH09 359 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 EFCAB1Q9HAE3 211 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 RNPEPL1Q9HAU8 725 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 ZNF281Q9Y2X9 895 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 ANKRD30BLA7E2S9 258 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 G3V4G9 280 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 RNASEK-C17orf49H0YIS7 233 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 NDUFAB1O14561 156 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 NPFFO15130 113 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 NDUFB3O43676 98 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SLC2A1P11166 492 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 DLX1P56177 255 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SMIM11AP58511 58 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 TAF13Q15543 124 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 BEAN1Q3B7T3 259 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 HIST2H2BDQ6DRA6 164 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SLC36A1Q7Z2H8 476 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 DPY19L4Q7Z388 723 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 DCXRQ7Z4W1 244 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 WDR86Q86TI4 376 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GALNT4Q8N4A0 578 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 FAM216BQ8N7L0 139 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PROKR2Q8NFJ6 384 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 ZNRF4Q8WWF5 429 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SEH1LQ96EE3 360 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 DMRTB1Q96MA1 342 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 KCNJ15Q99712 375 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 COPS4Q9BT78 406 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PPA2Q9H2U2 334 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 VIPAS39Q9H9C1 493 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 CENPMQ9NSP4 180 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 DCAF13Q9NV06 445 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 FBLN5Q9UBX5 448 aa11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SAMD4AQ9UPU9 718 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PLXNB1O43157 2135 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 ACOT8O14734 319 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 XRCC2O43543 280 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PAHP00439 452 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PSKH1P11801 424 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 DDOSTP39656 456 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SPIBQ01892 262 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 KLRD1Q13241 179 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 IKZF1Q13422 519 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 LYPD4Q6UWN0 246 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 WDR82Q6UXN9 313 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 HACD2Q6Y1H2 254 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 Q6ZTK2 550 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PNKDQ8N490 385 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 Q8N7P7 452 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 CYB561A3Q8NBI2 242 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OR1M1Q8NGA1 313 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OR5T2Q8NGG2 359 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OR51L1Q8NGJ5 315 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OR4C15Q8NGM1 316 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OR5R1Q8NH85 324 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SLAMF6Q96DU3 332 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 DCTN5Q9BTE1 182 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OPA3Q9H6K4 179 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PRPF19Q9UMS4 504 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 V9GYQ6 96 aa11.68□□□□□ -0.54
HLA-DQB2-229ENST00000411527 MEIOCA2RUB1 952 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GPR37O15354 613 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 TBX1O43435 398 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GMNNO75496 209 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PRB2P02812 416 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SPARCP09486 303 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GABRA5P31644 462 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 NAA10P41227 235 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GSSP48637 474 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 TGM4P49221 684 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 NUDT2P50583 147 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PSME3P61289 254 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 CSNK2BP67870 215 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 HERPUD1Q15011 391 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 LRRC10Q5BKY1 277 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SLC16A9Q7RTY1 509 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 ZDHHC21Q8IVQ6 265 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OR2T4Q8NH00 348 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 H1FXQ92522 213 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SPSB4Q96A44 273 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 DDOQ99489 341 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 ABCD2Q9UBJ2 740 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SIGLEC9Q9Y336 463 aa11.67□□□□□ -0.54
HLA-DQB2-229ENST00000411527 CDIPTO14735 213 aa11.66□□□□□ -0.54
HLA-DQB2-229ENST00000411527 ALX3O95076 343 aa11.66□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OPN1MWP04001 364 aa11.66□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OPN1MW2P0DN77 364 aa11.66□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OPN1MW3P0DN78 364 aa11.66□□□□□ -0.54
HLA-DQB2-229ENST00000411527 AMY2BP19961 511 aa11.66□□□□□ -0.54
HLA-DQB2-229ENST00000411527 SAA4P35542 130 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms