RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 STX3Q13277 289 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 SSX2Q16385 188 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 KCNMB1Q16558 191 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 CYP51A1Q16850 503 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 DGUOKQ16854 277 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 RSPO1Q2MKA7 263 aaPredicted RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM95Q3KNT9 176 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 LRIF1Q5T3J3 769 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 HIST2H3PS2Q5TEC6 136 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 OTPQ5XKR4 325 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 STUMQ69YW2 141 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZFAND6Q6FIF0 208 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 HCP5Q6MZN7 132 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 DNM1P34Q6PK57 102 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 CORO6Q6QEF8 472 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 WDR82Q6UXN9 313 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF788Q6ZQV5 615 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 Q6ZS46 218 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 HIST2H3AQ71DI3 136 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 DPY19L4Q7Z388 723 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 TSEN54Q7Z6J9 526 aaKnown RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 CPLX4Q7Z7G2 160 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 LHFPL4Q7Z7J7 247 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ADCK1Q86TW2 530 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 OAFQ86UD1 273 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 NAA40Q86UY6 237 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 TSPYL5Q86VY4 417 aaPredicted RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM219Q86XT9 240 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 MSRB3Q8IXL7 192 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 C11orf53Q8IXP5 236 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 MICU2Q8IYU8 434 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM185AQ8N0U4 392 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 EIF1ADQ8N9N8 165 aaKnown RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 LRRC75AQ8NAA5 344 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR1M1Q8NGA1 313 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR56B2PQ8NGI1 322 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR4D11Q8NGI4 311 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR9I1Q8NGQ6 314 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR8S1Q8NH09 359 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR5K1Q8NHB7 308 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 LRRC29Q8WV35 223 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 CAPSLQ8WWF8 208 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ANP32BQ92688 251 aaKnown RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ISOC1Q96CN7 298 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 FOXRED1Q96CU9 486 aaPredicted RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 BPIFA2Q96DR5 249 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 SEH1LQ96EE3 360 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 MALSU1Q96EH3 234 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF799Q96GE5 643 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 AKR1E2Q96JD6 320 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 PKNOX2Q96KN3 472 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 Q96M85 177 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF570Q96NI8 536 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 RAB3IPQ96QF0 476 aaPredicted RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 CITED4Q96RK1 184 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 PRR25Q96S07 402 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 PITX2Q99697 317 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ATF6BQ99941 703 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF649Q9BS31 505 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ROPN1BQ9BZX4 212 aaPredicted RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 POLR2J2Q9GZM3 115 aaKnown RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 NDEL1Q9GZM8 345 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 POLR2J3Q9H1A7 115 aaKnown RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 MYLK2Q9H1R3 596 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 SYT4Q9H2B2 425 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZMAT4Q9H898 229 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 NMNAT1Q9HAN9 279 aaPredicted RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ROPN1Q9HAT0 212 aaPredicted RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 SNTG1Q9NSN8 517 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 HAO2Q9NYQ3 351 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 VAPAQ9P0L0 249 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLAMF8Q9P0V8 285 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 LGALS13Q9UHV8 139 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 RIMS3Q9UJD0 308 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF391Q9UJN7 358 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 BAG5Q9UL15 447 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 COA3Q9Y2R0 106 aaPredicted RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 SH3GLB1Q9Y371 365 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 TBL2Q9Y4P3 447 aaKnown RBP1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 LHFPL6Q9Y693 200 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 SMAD5-AS1Q9Y6J3 95 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 TNCP24821 2201 aa1.9□□□□□ -2.11
RNU4-53P-201ENST00000410828 TRBV5-3A0A0A0MS03 114 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 RBMY1BA6NDE4 496 aaKnown RBP1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 RBMY1EA6NEQ0 496 aaKnown RBP1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ANXA2P2A6NMY6 339 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR2AT4A6NND4 320 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A22PA8MWA6 464 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 NUDT19A8MXV4 375 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 EFCAB9A8MZ26 197 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 M0QZK8 103 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 AKR7A2O43488 359 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 XRCC2O43543 280 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 PTP4A3O75365 173 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 RHBDL1O75783 438 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ARG1P05089 322 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 LPLP06858 475 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ACAA1P09110 424 aaPredicted RBP1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 RBMY1DP0C7P1 496 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms