RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RBMXP38159 391 aaKnown RBP18.92■□□□□ 0.62
PTCD3-203ENST00000409783 TMEM33P57088 247 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 KRTAP1-1Q07627 177 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 RAB40BQ12829 278 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 TP53I3Q53FA7 332 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 LAIR2Q6ISS4 152 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 ZNF540Q8NDQ6 660 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 OR52I1Q8NGK6 324 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 RORBQ92753 470 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 MEGF10Q96KG7 1140 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 GSX1Q9H4S2 264 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-203ENST00000409783 ZNF391Q9UJN7 358 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 CSPG4Q6UVK1 2322 aa18.92■□□□□ 0.62
PTCD3-203ENST00000409783 DAPL1A0PJW8 107 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 LOC110117498-PIK3R3F6TDL0 507 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 FAM20BO75063 409 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 TACSTD2P09758 323 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 USF1P22415 310 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-203ENST00000409783 MAB21L1Q13394 359 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 ELMOD2Q8IZ81 293 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 C8orf59Q8N0T1 100 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-203ENST00000409783 SLC22A4Q9H015 551 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 MOB1AQ9H8S9 216 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 DCAF16Q9NXF7 216 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 TREM2Q9NZC2 230 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 OR52A1Q9UKL2 312 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 SNX5Q9Y5X3 404 aa18.91■□□□□ 0.62
PTCD3-203ENST00000409783 RPP14O95059 124 aaKnown RBP18.9■□□□□ 0.62
PTCD3-203ENST00000409783 FADS2O95864 444 aaKnown RBP18.9■□□□□ 0.62
PTCD3-203ENST00000409783 TNFRSF1AP19438 455 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 CD200P41217 278 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 HFEQ30201 348 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 KRT74Q7RTS7 529 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 BIVMQ86UB2 503 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 CATSPERDQ86XM0 798 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 OR51E1Q8TCB6 317 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 DVL3Q92997 716 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-203ENST00000409783 PPP1R3EQ9H7J1 279 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 GCM1Q9NP62 436 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 FGF20Q9NP95 211 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-203ENST00000409783 ACOXLQ9NUZ1 547 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 SLC22A13Q9Y226 551 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 ABCA1O95477 2261 aa18.9■□□□□ 0.62
PTCD3-203ENST00000409783 MTORP42345 2549 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 A0A1B0GTI1 187 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 GMDSO60547 372 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 PTBP3O95758 552 aaKnown RBP18.89■□□□□ 0.61
PTCD3-203ENST00000409783 GPR6P46095 362 aaPredicted RBP18.89■□□□□ 0.61
PTCD3-203ENST00000409783 SRP9P49458 86 aaKnown RBP18.89■□□□□ 0.61
PTCD3-203ENST00000409783 OR12D2P58182 307 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 GALEQ14376 348 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 OR8G1Q15617 311 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 KLHL22Q53GT1 634 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 C6orf52Q5T4I8 152 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 KCTD20Q7Z5Y7 419 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 LHFPL3Q86UP9 236 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 CELF2-AS1Q8N7Q2 184 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 PLPP7Q8NBV4 271 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 CSNK2A3Q8NEV1 391 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 CCL17Q92583 94 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 ADAT1Q9BUB4 502 aaKnown RBP18.89■□□□□ 0.61
PTCD3-203ENST00000409783 JAM3Q9BX67 310 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 GPR84Q9NQS5 396 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 ERVK13-1Q9NX77 482 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 GNG8Q9UK08 70 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 RHBDD3Q9Y3P4 386 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 ABCA2Q9BZC7 2435 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 TLN2Q9Y4G6 2542 aa18.89■□□□□ 0.61
PTCD3-203ENST00000409783 WNT9BO14905 357 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 PPIHO43447 177 aaKnown RBP18.88■□□□□ 0.61
PTCD3-203ENST00000409783 LY6G6DO95868 133 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 PSMB10P40306 273 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 PMELP40967 661 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 GATA4P43694 442 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 BCL2L15Q5TBC7 163 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 Q6ZSR3 168 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 KLBQ86Z14 1044 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 PRSS35Q8N3Z0 413 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 INPP5EQ9NRR6 644 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 GTF2A1LQ9UNN4 478 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 PPP1R3CQ9UQK1 317 aa18.88■□□□□ 0.61
PTCD3-203ENST00000409783 NOP16Q9Y3C1 178 aaKnown RBP18.88■□□□□ 0.61
PTCD3-203ENST00000409783 IGHV3-64DA0A0J9YX35 117 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 LOC100289279A0A1B0GTE1 492 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 ANKRD30BLA7E2S9 258 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 CST4P01036 141 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 LIMS3P0CW19 117 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 LIMS4P0CW20 117 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 TMEM249Q2WGJ8 235 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 WDR38Q5JTN6 314 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 FDX2Q6P4F2 183 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 THAP5Q7Z6K1 395 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 ITFG2Q969R8 447 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 PELI1Q96FA3 418 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 ALG8Q9BVK2 526 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 TMEM106BQ9NUM4 274 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 RRP15Q9Y3B9 282 aaKnown RBP18.87■□□□□ 0.61
PTCD3-203ENST00000409783 WIPI2Q9Y4P8 454 aa18.87■□□□□ 0.61
PTCD3-203ENST00000409783 LRP5LA4QPB2 252 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 CLDN25C9JDP6 229 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms