RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 C2orf48Q96LS8 159 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 ZNF597Q96LX8 424 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 RDH12Q96NR8 316 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 GPA33Q99795 319 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 NIPSNAP1Q9BPW8 284 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 TMEM43Q9BTV4 400 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 C9orf16Q9BUW7 83 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 HES7Q9BYE0 225 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 SLC19A3Q9BZV2 496 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 DSN1Q9H410 356 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 TMEM27Q9HBJ8 222 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 MEPEQ9NQ76 525 aaPredicted RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 CTPS2Q9NRF8 586 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 MED17Q9NVC6 651 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 MED11Q9P086 117 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 PDP1Q9P0J1 537 aaPredicted RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 C15orf41Q9Y2V0 281 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 MRPS18CQ9Y3D5 142 aaKnown RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 CSAG2Q9Y5P2 127 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 ANKRD11Q6UB99 2663 aaPredicted RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 CHD8Q9HCK8 2581 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 MAP1BP46821 2468 aaKnown RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 ARHGAP21Q5T5U3 1957 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 MED12LQ86YW9 2145 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 A0A087WZY1 265 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 TMED7-TICAM2A0A0A6YYA0 188 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 TRAV17A0A0B4J275 112 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 TMEM72A0PK05 275 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 HTR3EA5X5Y0 456 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 F8VVB4 439 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 F8VWA3 439 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 G3V3Y1 287 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 K7EM74 188 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 GNGT2O14610 69 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ZNF208O43345 1280 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 GMFGO60234 142 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 OR10H3O60404 316 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 CBR3O75828 277 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 HPNP05981 417 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 YES1P07947 543 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 TSPAN19P0C672 248 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 PNMTP11086 282 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ANXA8P13928 327 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 UQCRBP14927 111 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ZNF17P17021 662 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ADRA2CP18825 462 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 DPP4P27487 766 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ELK4P28324 431 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 IFNA8P32881 189 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 SFTPDP35247 375 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 POLR2HP52434 150 aaKnown RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 UCNP55089 124 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 DSCR4P56555 118 aaPredicted RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 ARG2P78540 354 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 OC90Q02509 493 aaPredicted RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 MERTKQ12866 999 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 FOXF1Q12946 379 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 RFX4Q33E94 735 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 LINC00303Q3SY05 128 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 GLYR1Q49A26 553 aaPredicted RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 FGD3Q5JSP0 725 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 C5orf46Q6UWT4 87 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 IZUMO2Q6UXV1 221 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 C3P1Q6ZMU1 363 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ZNF730Q6ZMV8 503 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 Q6ZS92 163 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 GALNTL5Q7Z4T8 443 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 PRSS35Q8N3Z0 413 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 LINC00471Q8N535 108 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 TMCO5AQ8N6Q1 288 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 OR4K17Q8NGC6 315 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 OR1J4Q8NGS1 313 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 PFN4Q8NHR9 129 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ZNF563Q8TA94 476 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 PIGXQ8TBF5 258 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 MAGEE2Q8TD90 523 aaPredicted RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 DNAJC9Q8WXX5 260 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 TMEM234Q8WY98 164 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 MBOAT4Q96T53 435 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ZNF184Q99676 751 aaPredicted RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 FAM173AQ9BQD7 235 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 KATNB1Q9BVA0 655 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 GABARAPL3Q9BY60 117 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 TTTY12Q9BZ98 90 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 VCX3BQ9H321 246 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 PTGES2Q9H7Z7 377 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 QPCTLQ9NXS2 382 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 SMPD3Q9NY59 655 aaPredicted RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 CHRNA9Q9UGM1 479 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 BOKQ9UMX3 212 aaPredicted RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 MGAT4BQ9UQ53 548 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 POFUT2Q9Y2G5 429 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 KLF13Q9Y2Y9 288 aaPredicted RBP3.49□□□□□ -1.85
CLK1-203ENST00000409769 TMED7Q9Y3B3 224 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 MED31Q9Y3C7 131 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 LRRC42Q9Y546 428 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 FREM1Q5H8C1 2179 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 SHANK1Q9Y566 2161 aa3.49□□□□□ -1.85
CLK1-203ENST00000409769 ACACBO00763 2458 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms