RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 PTBP1P26599 531 aaKnown RBP eCLIP12.18□□□□□ -0.46
GPNMB-203ENST00000409458 POU3F4P49335 361 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 SCAND1P57086 179 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 RIN1Q13671 783 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 RGS21Q2M5E4 152 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 C1orf100Q5SVJ3 147 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 BEND4Q6ZU67 534 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 GDPD1Q8N9F7 314 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 WDR31Q8NA23 367 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 SLC30A7Q8NEW0 376 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 OR4D6Q8NGJ1 314 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 SYNPRQ8TBG9 265 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 AKAP1Q92667 903 aaKnown RBP eCLIP12.18□□□□□ -0.46
GPNMB-203ENST00000409458 SPSB4Q96A44 273 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 FAM3DQ96BQ1 224 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 C10orf35Q96D05 121 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 SPACA5Q96QH8 159 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 CNTD2Q9H8S5 307 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 SH3BGRL2Q9UJC5 107 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 ZNF391Q9UJN7 358 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 LOC100289279A0A1B0GTE1 492 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 TMEM272A0A1B0GTI8 110 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 DHRS7CA6NNS2 312 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 CSF3P09919 207 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 HOXC12P31275 282 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 WNT5AP41221 380 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 GSK3AP49840 483 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 EFNB2P52799 333 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 FAM3AP98173 230 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 UBE2V2Q15819 145 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 C2orf76Q3KRA6 126 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 DMRTC1Q5HYR2 192 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 ZNF474Q6S9Z5 364 aaPredicted RBP12.17□□□□□ -0.46
GPNMB-203ENST00000409458 NCCRP1Q6ZVX7 275 aaPredicted RBP12.17□□□□□ -0.46
GPNMB-203ENST00000409458 CCDC36Q8IYA8 594 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 IZUMO1Q8IYV9 350 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 PP6455Q8WZ26 134 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 FOXRED1Q96CU9 486 aaPredicted RBP12.17□□□□□ -0.46
GPNMB-203ENST00000409458 SORCS2Q96PQ0 1159 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 ABCG5Q9H222 651 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 POFUT1Q9H488 388 aa12.17□□□□□ -0.46
GPNMB-203ENST00000409458 A0A0G2JNJ9 132 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 NGFP01138 241 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ERCC1P07992 297 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-203ENST00000409458 HCKP08631 526 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ZNF93P35789 620 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-203ENST00000409458 PITPNBP48739 271 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 IDH3GP51553 393 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-203ENST00000409458 PMPCAQ10713 525 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 P2RY6Q15077 328 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 OR8B8Q15620 311 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 UTS2BQ765I0 119 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 BHLHA15Q7RTS1 189 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ZNF101Q8IZC7 436 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 SSC4DQ8WTU2 575 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 APOBEC3DQ96AK3 386 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-203ENST00000409458 UQCC2Q9BRT2 126 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 GPR173Q9NS66 373 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 RHBDL2Q9NX52 303 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 Q9UFV3 132 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 CHD8Q9HCK8 2581 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 A0A1W2PQ09 198 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ISPDA4D126 451 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 TMEM8BA6NDV4 472 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ALDOBP05062 364 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 PRF1P14222 555 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ARSBP15848 533 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 MAP2K3P46734 347 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ART1P52961 327 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 RBPJQ06330 500 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 RIPPLY1Q0D2K3 151 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 GK2Q14410 553 aaPredicted RBP12.16□□□□□ -0.46
GPNMB-203ENST00000409458 TBC1D28Q2M2D7 210 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 PYHIN1Q6K0P9 492 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 CRIP3Q6Q6R5 217 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 BIVMQ86UB2 503 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 CENPSQ8N2Z9 138 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 Q8N402 240 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 C17orf78Q8N4C9 275 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 NPRL2Q8WTW4 380 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 ABHD1Q96SE0 405 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 PTTG3PQ9NZH4 202 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 TBC1D24Q9ULP9 559 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 STARD10Q9Y365 291 aa12.16□□□□□ -0.46
GPNMB-203ENST00000409458 LDLRAD4O15165 306 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 AGFG2O95081 481 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 BMP5P22003 454 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 OR3A4PP47883 348 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 HLXQ14774 488 aaPredicted RBP12.15□□□□□ -0.46
GPNMB-203ENST00000409458 TAB1Q15750 504 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 TMEM42Q69YG0 159 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.46
GPNMB-203ENST00000409458 CHPT1Q8WUD6 406 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 RAB40AQ8WXH6 277 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 PIGTQ969N2 578 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 C1QTNF6Q9BXI9 259 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms