RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MRPL22Q9NWU5 206 aaKnown RBP13.74□□□□□ -0.21
LIMS2-205ENST00000409455 R4GMQ9 66 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 SPEGQ15772 3267 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 KIF26BQ2KJY2 2108 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 PRSS37A4D1T9 235 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 PLGP00747 810 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-205ENST00000409455 ID4P47928 161 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 SKP2Q13309 424 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 UNC119Q13432 240 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.73□□□□□ -0.21
LIMS2-205ENST00000409455 ADAM5Q6NVV9 412 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 CBLN3Q6UW01 205 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 MAMDC2Q7Z304 686 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-205ENST00000409455 OR52N5Q8NH56 324 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 C16orf52Q8NHV5 167 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 C2orf50Q96LR7 162 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 IP6K3Q96PC2 410 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 MEMO1Q9Y316 297 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 A0A0A6YYC8 382 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-205ENST00000409455 LMO7DNF2Z398 122 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 I3L1I5 382 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-205ENST00000409455 TSPAN15O95858 294 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 NPY4RP50391 375 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 AFF3P51826 1226 aaKnown RBP13.73□□□□□ -0.21
LIMS2-205ENST00000409455 BTG2P78543 158 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 GGACTQ9BVM4 153 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 TOLLIPQ9H0E2 274 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 SLC26A1Q9H2B4 701 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 PRR13Q9NZ81 148 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 GSKIPQ9P0R6 139 aa13.73□□□□□ -0.21
LIMS2-205ENST00000409455 OIP5O43482 229 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 BPNT1O95861 308 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 ISG15P05161 165 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 RD3LP0DJH9 198 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 SSTP61278 116 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 NUP54Q7Z3B4 507 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 ANGPTL5Q86XS5 388 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 LYPD6Q86Y78 171 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 ARRDC1Q8N5I2 433 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 FAM24BQ8N5W8 94 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 TMEM230Q96A57 120 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 MALSU1Q96EH3 234 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 OR10C1Q96KK4 312 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 SCGB3A2Q96PL1 93 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 GPR132Q9UNW8 380 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 RHBDD3Q9Y3P4 386 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 SCDO00767 359 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 PIAS2O75928 621 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 JTBO76095 146 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 CTSBP07858 339 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 DEFB110Q30KQ9 67 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 ACTBL2Q562R1 376 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 TMEM268Q5VZI3 342 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 MARCH3Q86UD3 253 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 FAM219AQ8IW50 185 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 KDM8Q8N371 416 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 OR9A4Q8NGU2 314 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 RAB3CQ96E17 227 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 DNAJA3Q96EY1 480 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 DGAT2Q96PD7 388 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 MAP3K3Q99759 626 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 C20orf24Q9BUV8 137 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 ADAM19Q9H013 955 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 UBQLN4Q9NRR5 601 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 OR52A1Q9UKL2 312 aa13.72□□□□□ -0.21
LIMS2-205ENST00000409455 ZNF264O43296 627 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 PPIHO43447 177 aaKnown RBP13.71□□□□□ -0.21
LIMS2-205ENST00000409455 IFNA17P01571 189 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 SRSF5Q13243 272 aaKnown RBP13.71□□□□□ -0.21
LIMS2-205ENST00000409455 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 C17orf82Q86X59 251 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-205ENST00000409455 FOXRED2Q8IWF2 684 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 ZNF615Q8N8J6 731 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 POC1AQ8NBT0 407 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 LYPD6BQ8NI32 183 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 ZNF775Q96BV0 537 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-205ENST00000409455 OR10A5Q9H207 317 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 TREM2Q9NZC2 230 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 CABIN1Q9Y6J0 2220 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 IGLV1-36A0A0B4J1U3 117 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 LMX1BO60663 402 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 VSIG8P0DPA2 414 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 HKR1P10072 659 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 DAOP14920 347 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 CTLA4P16410 223 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 GNALP38405 381 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 HTR5AP47898 357 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 SULT1A1P50225 295 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 CLDN6P56747 220 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 RPL27P61353 136 aaKnown RBP13.71□□□□□ -0.21
LIMS2-205ENST00000409455 DEFA6Q01524 100 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 RHEBQ15382 184 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 ACKR1Q16570 336 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 C9orf152Q5JTZ5 239 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 NCMAPQ5T1S8 102 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 FNDC7Q5VTL7 733 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 OGFOD3Q6PK18 319 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 MED25Q71SY5 747 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 SLC22A24Q8N4F4 322 aa13.71□□□□□ -0.21
LIMS2-205ENST00000409455 COMMD1Q8N668 190 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms