RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SETD2Q9BYW2 2564 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 HIVEP2P31629 2446 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 DAPL1A0PJW8 107 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 LOC110117498-PIK3R3F6TDL0 507 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 H0YJX3 145 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 OR8G1Q15617 311 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 TMEM249Q2WGJ8 235 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 LIPNQ5VXI9 398 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 CLEC9AQ6UXN8 241 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 ZNF771Q7L3S4 317 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 FTMTQ8N4E7 242 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 CELF2-AS1Q8N7Q2 184 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 CSNK2A3Q8NEV1 391 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 GCM1Q9NP62 436 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 G6PC2Q9NQR9 355 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 SNX5Q9Y5X3 404 aa16.79■□□□□ 0.28
PDLIM2-207ENST00000409417 CR1P17927 2039 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 ANKRD30BLA7E2S9 258 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 CLDN25C9JDP6 229 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 RPP14O95059 124 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 LY6G6DO95868 133 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 GNAO1P09471 354 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 GATA4P43694 442 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 CHN2P52757 468 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 MAB21L1Q13394 359 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 RIPK1Q13546 671 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 SNCBQ16143 134 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 SMN1Q16637 294 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 BCL2L15Q5TBC7 163 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 KCTD20Q7Z5Y7 419 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 ELMOD2Q8IZ81 293 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 SPERTQ8NA61 448 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 CNIH3Q8TBE1 160 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 TFAP2CQ92754 450 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 TIMD4Q96H15 378 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 TREM2Q9NZC2 230 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 OR52A1Q9UKL2 312 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 GTF2A1LQ9UNN4 478 aa16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 NSD1Q96L73 2696 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-207ENST00000409417 IFNL4K9M1U5 179 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 TTRP02766 147 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 ACKR3P25106 362 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 CD200P41217 278 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 KRTAP1-1Q07627 177 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 CDONQ4KMG0 1287 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 KLHL22Q53GT1 634 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 FAM220AQ7Z4H9 259 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 OR51E1Q8TCB6 317 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 RORBQ92753 470 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 PPP1R14AQ96A00 147 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 MYCBPQ99417 103 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 ADAT1Q9BUB4 502 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 INPP5EQ9NRR6 644 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 TMEM106BQ9NUM4 274 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 GNG8Q9UK08 70 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 MYRFQ9Y2G1 1151 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 RHBDD3Q9Y3P4 386 aa16.77■□□□□ 0.28
PDLIM2-207ENST00000409417 FAM20BO75063 409 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 IGLV3-1P01715 115 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 IGHA1P01876 353 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 HEXAP06865 529 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 ATP6V1B1P15313 513 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 TP53I3Q53FA7 332 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 EGFL6Q8IUX8 553 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 C8orf59Q8N0T1 100 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 HPS1Q92902 700 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 RAB1CQ92928 201 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 MRPL48Q96GC5 212 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 SOX7Q9BT81 388 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 PAPOLGQ9BWT3 736 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 VCX3BQ9H321 246 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 GPR84Q9NQS5 396 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 ACOXLQ9NUZ1 547 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 WIPI2Q9Y4P8 454 aa16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 NIPBLQ6KC79 2804 aaeCLIP16.76■□□□□ 0.27
PDLIM2-207ENST00000409417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 IGHV3-64DA0A0J9YX35 117 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 LRP5LA4QPB2 252 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 PTBP3O95758 552 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 SONP18583 2426 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 ACTA2P62736 377 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 ACTG2P63267 376 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 MZT1Q08AG7 82 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 GALEQ14376 348 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 PEG10Q86TG7 708 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 COMMD2Q86X83 199 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 CATSPERDQ86XM0 798 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 PLPP7Q8NBV4 271 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 OR52I1Q8NGK6 324 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 ERGIC1Q969X5 290 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 DCAF16Q9NXF7 216 aa16.75■□□□□ 0.27
PDLIM2-207ENST00000409417 CST4P01036 141 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 GNALP38405 381 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 MAP2K3P46734 347 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 AQP4P55087 323 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 OR12D2P58182 307 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 MVKQ03426 396 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 AVPI1Q5T686 147 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 KRT74Q7RTS7 529 aa16.74■□□□□ 0.27
PDLIM2-207ENST00000409417 MOGAT3Q86VF5 341 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms