RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 GALP22466 123 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 APOBEC3AP31941 199 aaPredicted RBP17.55■□□□□ 0.4
VSX1-203ENST00000409285 RPL5P46777 297 aaKnown RBP17.55■□□□□ 0.4
VSX1-203ENST00000409285 KLF3P57682 345 aaPredicted RBP17.55■□□□□ 0.4
VSX1-203ENST00000409285 TLE4Q04727 773 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 PSG7Q13046 419 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 COMMD2Q86X83 199 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 OR14K1Q8NGZ2 314 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 NEUROG1Q92886 237 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 CMBLQ96DG6 245 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 CGGBP1Q9UFW8 167 aaPredicted RBP17.55■□□□□ 0.4
VSX1-203ENST00000409285 FBN2P35556 2912 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 IQCF6A8MYZ5 107 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 HS3ST1O14792 307 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 TGFBR2P37173 567 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 MPV17P39210 176 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 MAP2K3P46734 347 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 FABP6P51161 128 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 EFNB3Q15768 340 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 TMEM255AQ5JRV8 349 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 CD200R1LQ6Q8B3 271 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 VHLLQ6RSH7 139 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 FTMTQ8N4E7 242 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 CSNK2A3Q8NEV1 391 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 OR51A4Q8NGJ6 313 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 OR10AC1Q8NH08 325 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 FBXW5Q969U6 566 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 FAM71F1Q96KD3 344 aaPredicted RBP17.54■□□□□ 0.4
VSX1-203ENST00000409285 SOX7Q9BT81 388 aa17.54■□□□□ 0.4
VSX1-203ENST00000409285 PURGQ9UJV8 347 aaKnown RBP17.54■□□□□ 0.4
VSX1-203ENST00000409285 UNC79Q9P2D8 2635 aa17.53■□□□□ 0.4
VSX1-203ENST00000409285 CD300LBA8K4G0 201 aa17.53■□□□□ 0.4
VSX1-203ENST00000409285 SERPINA3P01011 423 aa17.53■□□□□ 0.4
VSX1-203ENST00000409285 OR4A8P0C604 315 aa17.53■□□□□ 0.4
VSX1-203ENST00000409285 ACKR3P25106 362 aa17.53■□□□□ 0.4
VSX1-203ENST00000409285 SELENOVP59797 346 aa17.53■□□□□ 0.4
VSX1-203ENST00000409285 Q499Y3 187 aa17.53■□□□□ 0.4
VSX1-203ENST00000409285 SEMA6DQ8NFY4 1073 aa17.53■□□□□ 0.4
VSX1-203ENST00000409285 MRPL37Q9BZE1 423 aaKnown RBP17.53■□□□□ 0.4
VSX1-203ENST00000409285 ZNF275Q9NSD4 429 aaPredicted RBP17.53■□□□□ 0.4
VSX1-203ENST00000409285 A0A1B0GWJ7 208 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 HLA-DPB1P04440 258 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 TTKP33981 857 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 SERPINF1P36955 418 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 RPS25P62851 125 aaKnown RBP17.52■□□□□ 0.4
VSX1-203ENST00000409285 RIPPLY1Q0D2K3 151 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 ZNF295-AS1Q8N0V1 137 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 OR56B2PQ8NGI1 322 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 YIPF6Q96EC8 236 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 TMED9Q9BVK6 235 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 CLEC4MQ9H2X3 399 aaPredicted RBP17.52■□□□□ 0.4
VSX1-203ENST00000409285 PLK3Q9H4B4 646 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 FAIMQ9NVQ4 179 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 MRPL15Q9P015 296 aaKnown RBP17.52■□□□□ 0.4
VSX1-203ENST00000409285 DHDHQ9UQ10 334 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 APCP25054 2843 aa17.52■□□□□ 0.4
VSX1-203ENST00000409285 GGT3PA6NGU5 568 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 GATBO75879 557 aaKnown RBP17.51■□□□□ 0.39
VSX1-203ENST00000409285 OCM2P0CE71 109 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 MAPK3P27361 379 aaPredicted RBP17.51■□□□□ 0.39
VSX1-203ENST00000409285 MOGQ16653 247 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 OR2T2Q6IF00 324 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 PARP16Q8N5Y8 322 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 ZNF611Q8N823 705 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 OR13C3Q8NGS6 347 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 OR13C5Q8NGS8 318 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 PHYHIPQ92561 330 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 TMEM106AQ96A25 262 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 PLEKHA1Q9HB21 404 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 FBXO9Q9UK97 447 aaPredicted RBP17.51■□□□□ 0.39
VSX1-203ENST00000409285 TANC2Q9HCD6 1990 aa17.51■□□□□ 0.39
VSX1-203ENST00000409285 ZNF816-ZNF321PA0A0X1KG74 233 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 ZNF879B4DU55 563 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 B9A039 149 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 CST4P01036 141 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 RAF1P04049 648 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 CD2P06729 351 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 CD36P16671 472 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 TMEM42Q69YG0 159 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 ZNF787Q6DD87 383 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 UNQ9370/PRO34162Q6UXP9 181 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 LRP11Q86VZ4 500 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 MUC15Q8N387 334 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 OR8G5Q8NG78 346 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 TSEN15Q8WW01 171 aaKnown RBP17.5■□□□□ 0.39
VSX1-203ENST00000409285 PP6455Q8WZ26 134 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 DUSP13Q9UII6 198 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 FZR1Q9UM11 496 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 STUB1Q9UNE7 303 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 PIGLQ9Y2B2 252 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 CACNA1DQ01668 2161 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 TRBV5-7A0A0A0MS05 114 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 TRDV1A0A1B0GX56 115 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 RGS9O75916 674 aaPredicted RBP17.5■□□□□ 0.39
VSX1-203ENST00000409285 DANCRP0C864 163 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 SSTR2P30874 369 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 CRYBB2P43320 205 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 MMP15P51511 669 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 PRSS12P56730 875 aa17.5■□□□□ 0.39
VSX1-203ENST00000409285 FABP5Q01469 135 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms