RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TMEM240Q5SV17 173 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 DRAM2Q6UX65 266 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 TMEM179BQ7Z7N9 219 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 ZFP62Q8NB50 900 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 OR4C16Q8NGL9 310 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 OR51H1Q8NH63 302 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 OR1F12Q8NHA8 337 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 PIK3IP1Q96FE7 263 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 GINS3Q9BRX5 216 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 DUSP13Q9UII6 198 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 TIMM9Q9Y5J7 89 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 ADAMTS7Q9UKP4 1686 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 ECM29Q5VYK3 1845 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 G3V3Q6 166 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 COX7A2P2O60397 106 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 SFT2D2O95562 160 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CD3DP04234 171 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 RAE1P78406 368 aaKnown RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 JMJD6Q6NYC1 403 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CLDN23Q96B33 292 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 SPACA9Q96E40 222 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 RAB40CQ96S21 281 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 DHRS9Q9BPW9 319 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 MEIKINA0A087WXM9 373 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 FITM1A5D6W6 292 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CRYABP02511 175 aaKnown RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 IL13RA2Q14627 380 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CTF1Q16619 201 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CST9Q5W186 159 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CLRN3Q8NCR9 226 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 HMGCLL1Q8TB92 370 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 COMMD5Q9GZQ3 224 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 TMPRSS5Q9H3S3 457 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 MYH10P35580 1976 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 YIF1AO95070 293 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 HPP00738 406 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 PCBP4P57723 403 aaKnown RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CLN3Q13286 438 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 FOXB2Q5VYV0 432 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 RGS7BPQ6MZT1 257 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 TP53I13Q8NBR0 393 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 EDEM2Q9BV94 578 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 PRR14Q9BWN1 585 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 WDR61Q9GZS3 305 aaKnown RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 MYOZ1Q9NP98 299 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 TRGV10A0A0A0MS01 117 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 TOX3O15405 576 aaPredicted RBP7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 CRYAAP02489 173 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 VMA21Q3ZAQ7 101 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 YRDCQ86U90 279 aaKnown RBP7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 OR52N4Q8NGI2 321 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 OR2A1Q8NGT9 310 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ATOH1Q92858 354 aaPredicted RBP7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 UBE2FQ969M7 185 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 FAM122AQ96E09 287 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 AMMECR1Q9Y4X0 333 aaPredicted RBP7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 CRYM-AS1A6NIL9 109 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 PRRT4C9JH25 899 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 CLEC3BP05452 202 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 IL11RAQ14626 422 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 SMAD2Q15796 467 aaKnown RBP7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF141Q15928 474 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 SPANXN5Q5MJ07 72 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ADAM5Q6NVV9 412 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 RHOUQ7L0Q8 258 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 SPEM1Q8N4L4 309 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF680Q8NEM1 530 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 LHX4Q969G2 390 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ISG20L2Q9H9L3 353 aaKnown RBP7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 LRP12Q9Y561 859 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 M0R1B8 84 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 OR2J2O76002 312 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 NXPH3O95157 252 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 FGF2P09038 288 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ST6GAL1P15907 406 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 F2RP25116 425 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 HMGA2P52926 109 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 FOXF1Q12946 379 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 SURF2Q15527 256 aaPredicted RBP7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 TDHQ8IZJ6 230 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 OR5M1Q8NGP8 315 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 RNF167Q9H6Y7 350 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 GLRX2Q9NS18 164 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 CA10Q9NS85 328 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 FAM166BA8MTA8 275 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 HRO43593 1189 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 FUT3P21217 361 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 PAQR6Q6TCH4 344 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 SIRT6Q8N6T7 355 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ERGIC1Q969X5 290 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 MRGPRX1Q96LB2 322 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ST3GAL6Q9Y274 331 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 CCDC187A0A096LP49 1063 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 TMEM272A0A1B0GTI8 110 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 A0A1W2PQD3 144 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 HMSDA8MTL9 139 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 G3V3Y1 287 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 GUSBP08236 651 aa7.53□□□□□ -1.2
SPTLC3-201ENST00000399002 ACSM4P0C7M7 580 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms