RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 AGFG2O95081 481 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 PAHP00439 452 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 GLRA1P23415 457 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 MMP16P51512 607 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 FXYD4P59646 89 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 CAMK2BQ13554 666 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 UNQ6494/PRO21346Q6UXR6 183 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 GDPD3Q7L5L3 318 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 FJX1Q86VR8 437 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 ZPLD1Q8TCW7 415 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 SLC7A6Q92536 515 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 SPACA5Q96QH8 159 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 BANF2Q9H503 90 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 ERRFI1Q9UJM3 462 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 UGT2A1Q9Y4X1 527 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 TUBAL3A6NHL2 446 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 SH2D1BO14796 132 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 TFP02787 698 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF708P17019 499 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 TAS2R31P59538 309 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 SLC25A47Q6Q0C1 308 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 LINC00114Q6XXX2 140 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 CCDC71Q8IV32 467 aaPredicted RBP7.29□□□□□ -1.24
PTPRD-204ENST00000397606 OR2AE1Q8NHA4 323 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ADAT1Q9BUB4 502 aaKnown RBP7.29□□□□□ -1.24
PTPRD-204ENST00000397606 PTDSS2Q9BVG9 487 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 SLC17A2O00624 439 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 HSPB6O14558 160 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 KLF4O43474 513 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 IGHMP01871 453 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 PCSK6P29122 969 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ACSM1Q08AH1 577 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 DMKNQ6E0U4 476 aaPredicted RBP7.29□□□□□ -1.24
PTPRD-204ENST00000397606 C1orf174Q8IYL3 243 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 SHISA5Q8N114 240 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ARHGEF39Q8N4T4 335 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF519Q8TB69 540 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ENY2Q9NPA8 101 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF275Q9NSD4 429 aaPredicted RBP7.29□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1B0GUH1 482 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 CDRT15L2A8MXV6 281 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 OGG1O15527 345 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 CCL2P13500 99 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 AKR1C4P17516 323 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 Q8IYB0 196 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 THAP6Q8TBB0 222 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 C10orf35Q96D05 121 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ETAA1Q9NY74 926 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 EHFQ9NZC4 300 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 MPC1Q9Y5U8 109 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1W2PQ09 198 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 CLPSP04118 112 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 ACSM4P0C7M7 580 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 DCTDP32321 178 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 EDDM3BP56851 147 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 MAB21L1Q13394 359 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 FAM27D1Q5T7N8 215 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 SSX6Q7RTT6 188 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 OR8B12Q8NGG6 310 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 OR4K15Q8NH41 348 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 DYNC2LI1Q8TCX1 351 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 PPA2Q9H2U2 334 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 FN3KRPQ9HA64 309 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 DEPPQ9NTK1 212 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 DLL3Q9NYJ7 618 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 GNG12Q9UBI6 72 aa7.29□□□□□ -1.24
PTPRD-204ENST00000397606 EPXP11678 715 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 Q0VFX4 171 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 SMIM21Q3B7S5 101 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 C2orf76Q3KRA6 126 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF554Q86TJ5 538 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 SGPP2Q8IWX5 399 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 INO80EQ8NBZ0 244 aaPredicted RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 OR4M1Q8NGD0 313 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 TMEM45BQ96B21 275 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 RRNAD1Q96FB5 475 aaKnown RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 GPR137Q96N19 417 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 DERL3Q96Q80 235 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 UQCC2Q9BRT2 126 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 ASCL3Q9NQ33 180 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 MDC1Q14676 2089 aaKnown RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 IGLV1-36A0A0B4J1U3 117 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 KIR2DS1A0A191URI9 304 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 SPRY3O43610 288 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 KNG1P01042 644 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 EDN3P14138 238 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 PCMT1P22061 227 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 GDNFP39905 211 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 KIR2DS4P43632 304 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 TNK1Q13470 666 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 KIR2DS1Q14954 304 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 HYAL4Q2M3T9 481 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 BPIFB2Q8N4F0 458 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 OR2Z1Q8NG97 314 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 OR10K1Q8NGX5 313 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 ZFAND1Q8TCF1 268 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 CMBLQ96DG6 245 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 OCSTAMPQ9BR26 566 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 OPN3Q9H1Y3 402 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms