RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MIB2Q96AX9 1013 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 SEC22AQ96IW7 307 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 MMP25Q9NPA2 562 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 HAO2Q9NYQ3 351 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 DOK5Q9P104 306 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 CGGBP1Q9UFW8 167 aaPredicted RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 SHPKQ9UHJ6 478 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 VDAC3Q9Y277 283 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 FARSAQ9Y285 508 aaKnown RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 CLDN16Q9Y5I7 305 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 ETV7Q9Y603 341 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 TEX13DA0A0J9YY54 714 aaPredicted RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 CPED1A4D0V7 1026 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 TMEM150CB9EJG8 249 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 SOX1O00570 391 aaPredicted RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 AGPAT2O15120 278 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 CYTIPO60759 359 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 GLSO94925 669 aaPredicted RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 OR6A2O95222 327 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 UTS2O95399 124 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 PNPP00491 289 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 ITGB2P05107 769 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 SNRPCP09234 159 aaKnown RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 DAOP14920 347 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 PGAM2P15259 253 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 CXCR1P25024 350 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 ARL4DP49703 201 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 RGS19P49795 217 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 SULT1A1P50225 295 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 EFNA3P52797 238 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 HSD11B2P80365 405 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 ZNF117Q03924 483 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 Q499Y3 187 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 SCGB2B2Q4G0G5 96 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 SAPCD1Q5SSQ6 148 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 LINC00114Q6XXX2 140 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 LANCL3Q6ZV70 420 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 GALNT16Q8N428 558 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 BPIFB2Q8N4F0 458 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 ZNF610Q8N9Z0 462 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 OR1J1Q8NGS3 322 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 PTPMT1Q8WUK0 201 aaPredicted RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 METTL21AQ8WXB1 218 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 DCUN1D4Q92564 292 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 FAM46BQ96A09 425 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 FOXRED1Q96CU9 486 aaPredicted RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 SMIM8Q96KF7 97 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 OR5B2Q96R09 309 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 NUDT22Q9BRQ3 303 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 ATG101Q9BSB4 218 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 LMF2Q9BU23 707 aaKnown RBP4.49□□□□□ -1.69
SSR1-202ENST00000397511 SELENOIQ9C0D9 397 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 LMAN1LQ9HAT1 526 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 NBEAQ8NFP9 2946 aa4.49□□□□□ -1.69
SSR1-202ENST00000397511 KIR2DS5A0A0G2JLQ3 304 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 A0A0G2JNG1 304 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR5H15A6NDH6 313 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR5H1A6NKK0 313 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 A8MWP6 167 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 C2CD4DB7Z1M9 353 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 H3BML4 177 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 KIR2DS3K7RE56 304 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 XKRYO14609 159 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CCSO14618 274 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 TNFRSF10CO14798 259 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 TOX3O15405 576 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 LMX1BO60663 402 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 UPK3AO75631 287 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ARG1P05089 322 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 LINC00614P0C842 121 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FGF7P21781 194 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 IL12BP29460 328 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR1D5P58170 312 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 PRPS1P60891 318 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 YPEL5P62699 121 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ADAM8P78325 824 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 NKX6-1P78426 367 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 FMODQ06828 376 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 KIR2DS5Q14953 304 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 AWAT2Q6E213 333 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 WBP2NLQ6ICG8 309 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR2A2Q6IF42 318 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CD163Q86VB7 1156 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SLC35F3Q8IY50 421 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SYS1Q8N2H4 156 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZNF615Q8N8J6 731 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 PNLDC1Q8NA58 520 aaKnown RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR1J2Q8NGS2 313 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 TERB2Q8NHR7 220 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ST7LQ8TDW4 575 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZBTB8AQ96BR9 441 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CYYR1Q96J86 154 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 IP6K3Q96PC2 410 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SLC25A21Q9BQT8 299 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 EMC6Q9BV81 110 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 POTEKPQ9BYX7 375 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 S1PR5Q9H228 398 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SMOC1Q9H4F8 434 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ELOVL3Q9HB03 270 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 UBQLN4Q9NRR5 601 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms