RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 THRSPQ92748 146 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 SLITRK2Q9H156 845 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 OR10A4Q9H209 315 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 NDRG3Q9UGV2 375 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 FZR1Q9UM11 496 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 ROS1P08922 2347 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 GGT3PA6NGU5 568 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 ATP6V1G2-DDX39BF2Z307 99 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 ZNF12P17014 697 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 CD40P25942 277 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 TMEM108Q6UXF1 575 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 SERPINA12Q8IW75 414 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 ZNF808Q8N4W9 903 aaPredicted RBP18.25■□□□□ 0.51
CPNE1-204ENST00000397443 SPSB4Q96A44 273 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 SLC30A2Q9BRI3 323 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 BARHL1Q9BZE3 327 aa18.25■□□□□ 0.51
CPNE1-204ENST00000397443 USP9XQ93008 2570 aaPredicted RBP18.24■□□□□ 0.51
CPNE1-204ENST00000397443 TRAV1-2A0A0B4J238 106 aa18.24■□□□□ 0.51
CPNE1-204ENST00000397443 RAB3BP20337 219 aa18.24■□□□□ 0.51
CPNE1-204ENST00000397443 MAP2K3P46734 347 aa18.24■□□□□ 0.51
CPNE1-204ENST00000397443 OR56B2PQ8NGI1 322 aa18.24■□□□□ 0.51
CPNE1-204ENST00000397443 SLC25A46Q96AG3 418 aa18.24■□□□□ 0.51
CPNE1-204ENST00000397443 REPIN1Q9BWE0 567 aaKnown RBP18.24■□□□□ 0.51
CPNE1-204ENST00000397443 ZNF391Q9UJN7 358 aa18.24■□□□□ 0.51
CPNE1-204ENST00000397443 PLCE1Q9P212 2302 aa18.24■□□□□ 0.51
CPNE1-204ENST00000397443 HCFC1P51610 2035 aa18.24■□□□□ 0.51
CPNE1-204ENST00000397443 TUBAL3A6NHL2 446 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 RAD52P43351 418 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 PPP3R1P63098 170 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 BSPH1Q075Z2 132 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 RIPPLY1Q0D2K3 151 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 VHLLQ6RSH7 139 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 PARP16Q8N5Y8 322 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 OR5D14Q8NGL3 314 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 NPRL2Q8WTW4 380 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 PPP1R3EQ9H7J1 279 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 PTTG2Q9NZH5 202 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 SPTAN1Q13813 2472 aaKnown RBP18.23■□□□□ 0.51
CPNE1-204ENST00000397443 ICE1Q9Y2F5 2266 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 DPRXA6NFQ7 191 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 ANXA2P2A6NMY6 339 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 ABCD4O14678 606 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 ADRA2CP18825 462 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 CFL1P23528 166 aaKnown RBP18.23■□□□□ 0.51
CPNE1-204ENST00000397443 PAX7P23759 505 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 SNTB2Q13425 540 aaKnown RBP18.23■□□□□ 0.51
CPNE1-204ENST00000397443 DGUOKQ16854 277 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 OR2T2Q6IF00 324 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 LRRTM1Q86UE6 522 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 OR5AS1Q8N127 324 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 CMBLQ96DG6 245 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 NPDC1Q9NQX5 325 aaPredicted RBP18.23■□□□□ 0.51
CPNE1-204ENST00000397443 PMF1-BGLAPU3KQ54 211 aa18.23■□□□□ 0.51
CPNE1-204ENST00000397443 LOC390937A0A1W2PQ73 354 aa18.22■□□□□ 0.51
CPNE1-204ENST00000397443 OCMP0CE72 109 aaPredicted RBP18.22■□□□□ 0.51
CPNE1-204ENST00000397443 SOX6P35712 828 aa18.22■□□□□ 0.51
CPNE1-204ENST00000397443 RORCP51449 518 aa18.22■□□□□ 0.51
CPNE1-204ENST00000397443 C3orf36Q3SXR2 165 aa18.22■□□□□ 0.51
CPNE1-204ENST00000397443 GFI1Q99684 422 aa18.22■□□□□ 0.51
CPNE1-204ENST00000397443 GPR173Q9NS66 373 aa18.22■□□□□ 0.51
CPNE1-204ENST00000397443 CRIM1Q9NZV1 1036 aa18.22■□□□□ 0.51
CPNE1-204ENST00000397443 ICMTO60725 284 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 IGFBP3P17936 291 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-204ENST00000397443 MPV17P39210 176 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 FABP6P51161 128 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 SORDQ00796 357 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 OR8B8Q15620 311 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 SLC22A25Q6T423 547 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 UNQ6126/PRO20091Q6UXV3 157 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 TPRA1Q86W33 373 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 OR1M1Q8NGA1 313 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 KLF14Q8TD94 323 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-204ENST00000397443 PIGCQ92535 297 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 SPACA5Q96QH8 159 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 BCL2L14Q9BZR8 327 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 ZCCHC4Q9H5U6 513 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 NGBQ9NPG2 151 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 DAPK2Q9UIK4 370 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 RHBDD3Q9Y3P4 386 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 J3QW42 95 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 SLC2A2P11168 524 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-204ENST00000397443 FSTP19883 344 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 RAB3AP20336 220 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 AGAP20933 346 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 PTAFRP25105 342 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 DDOSTP39656 456 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 IDNKQ5T6J7 187 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 C1QTNF12Q5T7M4 302 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 ADAM5Q6NVV9 412 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 PAPOLGQ9BWT3 736 aaKnown RBP18.21■□□□□ 0.51
CPNE1-204ENST00000397443 SLIRPQ9GZT3 109 aaKnown RBP18.21■□□□□ 0.51
CPNE1-204ENST00000397443 FOXJ3Q9UPW0 622 aa18.21■□□□□ 0.51
CPNE1-204ENST00000397443 CD300LBA8K4G0 201 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 PDCD5O14737 125 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 LILRA1O75019 489 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 THBS4P35443 961 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 ALKBH6Q3KRA9 238 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 HES5Q5TA89 166 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 SFXN4Q6P4A7 337 aa18.2■□□□□ 0.5
CPNE1-204ENST00000397443 Q6ZSR3 168 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms