RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 C8orf59Q8N0T1 100 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 ACBD7Q8N6N7 88 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 CCL17Q92583 94 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 DVL3Q92997 716 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 SIGLEC11Q96RL6 698 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 SOX7Q9BT81 388 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 GSX1Q9H4S2 264 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 GNG8Q9UK08 70 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 NOP16Q9Y3C1 178 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 IGHV3-64DA0A0J9YX35 117 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 A0A0U1RQV5 110 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 ANKRD30BLA7E2S9 258 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 CLDN25C9JDP6 229 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 FADS2O95864 444 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 SRP9P49458 86 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 TMEM33P57088 247 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 RAB40BQ12829 278 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 OR8B8Q15620 311 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 PPP1R14AQ96A00 147 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 G6PC2Q9NQR9 355 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 ACOXLQ9NUZ1 547 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 OR52A1Q9UKL2 312 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 MYRFQ9Y2G1 1151 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 ABCA1O95477 2261 aa17.93■□□□□ 0.46
TSPAN4-206ENST00000397408 ATP6V1G2O95670 118 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 TTRP02766 147 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 ACKR3P25106 362 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 CDONQ4KMG0 1287 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 CSNK2A3Q8NEV1 391 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 OR52I1Q8NGK6 324 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 OR51E1Q8TCB6 317 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 TFAP2CQ92754 450 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 VCX3BQ9H321 246 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 GPR84Q9NQS5 396 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 MRPS18AQ9NVS2 196 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 DCAF16Q9NXF7 216 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 PPP1R3CQ9UQK1 317 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 SNX5Q9Y5X3 404 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 HSPE1-MOB4S4R3N1 261 aa17.92■□□□□ 0.46
TSPAN4-206ENST00000397408 GMDSO60547 372 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 IGHA1P01876 353 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 RBMXP38159 391 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 RIPK1Q13546 671 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 C6orf52Q5T4I8 152 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 AVPI1Q5T686 147 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 CLEC9AQ6UXN8 241 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 ELMOD2Q8IZ81 293 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 RORBQ92753 470 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 FAM71F1Q96KD3 344 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 PAPOLGQ9BWT3 736 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 TMEM106BQ9NUM4 274 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 SLC22A13Q9Y226 551 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 DYSFO75923 2080 aa17.91■□□□□ 0.46
TSPAN4-206ENST00000397408 LRP5LA4QPB2 252 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 H0YJX3 145 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 FAM20BO75063 409 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 IGLV3-1P01715 115 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 TACSTD2P09758 323 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 GNALP38405 381 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 PSMB10P40306 273 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 CD200P41217 278 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 ACTA2P62736 377 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 ACTG2P63267 376 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 MVKQ03426 396 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 SLC3A1Q07837 685 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 MAB21L1Q13394 359 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 TMEM249Q2WGJ8 235 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 KLHL22Q53GT1 634 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 LHFPL3Q86UP9 236 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 CATSPERDQ86XM0 798 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 FTMTQ8N4E7 242 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 MRPL48Q96GC5 212 aaKnown RBP17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 ALG8Q9BVK2 526 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 NARFLQ9H6Q4 476 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 GCM1Q9NP62 436 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 INPP5EQ9NRR6 644 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 RHBDD3Q9Y3P4 386 aa17.9■□□□□ 0.46
TSPAN4-206ENST00000397408 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 LY6G6DO95868 133 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 CHN2P52757 468 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 OR12D2P58182 307 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 KRTAP1-1Q07627 177 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 GALEQ14376 348 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 SNCBQ16143 134 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 PRAMEF6Q5VXH4 476 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 MOGAT3Q86VF5 341 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 KLBQ86Z14 1044 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 CELF2-AS1Q8N7Q2 184 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 ZNF420Q8TAQ5 688 aaPredicted RBP17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 TIMD4Q96H15 378 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 C4orf36Q96KX1 117 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 ERVK13-1Q9NX77 482 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 WIPI2Q9Y4P8 454 aa17.89■□□□□ 0.46
TSPAN4-206ENST00000397408 J3QLW9 94 aa17.89■□□□□ 0.45
TSPAN4-206ENST00000397408 ZNF19P17023 458 aa17.89■□□□□ 0.45
TSPAN4-206ENST00000397408 MAP2K3P46734 347 aa17.89■□□□□ 0.45
TSPAN4-206ENST00000397408 ODF4Q2M2E3 257 aa17.89■□□□□ 0.45
TSPAN4-206ENST00000397408 WDR38Q5JTN6 314 aa17.89■□□□□ 0.45
TSPAN4-206ENST00000397408 KCTD20Q7Z5Y7 419 aa17.89■□□□□ 0.45
TSPAN4-206ENST00000397408 SPERTQ8NA61 448 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms