RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ETV7Q9Y603 341 aa16.46■□□□□ 0.23
TSPAN4-204ENST00000397404 A0A0G2JK05 382 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 ZNF816-ZNF321PA0A0X1KG74 233 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 CLEC2LP0C7M8 214 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 ZNF35P13682 527 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 PRKACBP22694 351 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 GSK3AP49840 483 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 UCP2P55851 309 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 FAM3AP98173 230 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 ZNF45Q02386 682 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 CLVS2Q5SYC1 327 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 LIX1LQ8IVB5 337 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 ZNF808Q8N4W9 903 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 OR6M1Q8NGM8 313 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 RNASE6Q93091 150 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 ADAT3Q96EY9 351 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 SORCS2Q96PQ0 1159 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 TAS2R4Q9NYW5 299 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 KCNN3Q9UGI6 736 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 STEAP1Q9UHE8 339 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 AK6Q9Y3D8 172 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 CMAHPQ9Y471 501 aa16.45■□□□□ 0.22
TSPAN4-204ENST00000397404 TRAV8-7A0A075B6U6 113 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 SLC17A2O00624 439 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 CRYAAP02489 173 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 MAS1P04201 325 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 OCMP0CE72 109 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 PTBP1P26599 531 aaKnown RBP eCLIP16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 BMXP51813 675 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 RPS23P62266 143 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 ZNF92Q03936 586 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 FAM27E3Q08E93 113 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 GK2Q14410 553 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 TAB1Q15750 504 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 FAM189A2Q15884 450 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 SPANXN2Q5MJ10 180 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 IDNKQ5T6J7 187 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 TMEM42Q69YG0 159 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 MS4A3Q96HJ5 214 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 METTL17Q9H7H0 456 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 DAPK2Q9UIK4 370 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 SPATA2Q9UM82 520 aa16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 NOP16Q9Y3C1 178 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-204ENST00000397404 CLDN25C9JDP6 229 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 SMPD2O60906 423 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 TPPPO94811 219 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 CECR9P0C854 216 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 RAC2P15153 192 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 PTAFRP25105 342 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 WNT5AP41221 380 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 MAGEB1P43366 347 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 TSC22D1Q15714 1073 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 METAP1DQ6UB28 335 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 TMEM108Q6UXF1 575 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 LRRC28Q86X40 367 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 PNLDC1Q8NA58 520 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 DNAAF1Q8NEP3 725 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 CA5BP1Q8WTZ4 195 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 GHRLQ9UBU3 117 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 NDRG3Q9UGV2 375 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 NBEAQ8NFP9 2946 aa16.43■□□□□ 0.22
TSPAN4-204ENST00000397404 IGHV1-18A0A0C4DH31 117 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 RGS5O15539 181 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 CST4P01036 141 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 PRF1P14222 555 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 ADRA2CP18825 462 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 PPP1CBP62140 327 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 ZNF846Q147U1 533 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 C1orf100Q5SVJ3 147 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 XKRXQ6PP77 449 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 OR2AE1Q8NHA4 323 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 ZNF671Q8TAW3 534 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 CCDC120Q96HB5 630 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 PLGRKTQ9HBL7 147 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 KCNJ16Q9NPI9 418 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 SLC7A11Q9UPY5 501 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 STARD10Q9Y365 291 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 CACNA1BQ00975 2339 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 IGHV2OR16-5A0A0B4J2B6 119 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 GGT3PA6NGU5 568 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 B8ZZF3 427 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 UBBP0CG47 229 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 CCL2P13500 99 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 OR10A3P58181 314 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 NAAAQ02083 359 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 ASPHD2Q6ICH7 369 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 FJX1Q86VR8 437 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 NR2C2APQ86WQ0 139 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 ZFAND2BQ8WV99 257 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 PTX4Q96A99 478 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 SLC22A4Q9H015 551 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 MRPL15Q9P015 296 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 MPC1Q9Y5U8 109 aa16.42■□□□□ 0.22
TSPAN4-204ENST00000397404 IGSF10Q6WRI0 2623 aa16.41■□□□□ 0.22
TSPAN4-204ENST00000397404 A0A1W2PR80 420 aa16.41■□□□□ 0.22
TSPAN4-204ENST00000397404 NRASP01111 189 aa16.41■□□□□ 0.22
TSPAN4-204ENST00000397404 APOA1P02647 267 aa16.41■□□□□ 0.22
TSPAN4-204ENST00000397404 ATF1P18846 271 aa16.41■□□□□ 0.22
TSPAN4-204ENST00000397404 HTR2CP28335 458 aa16.41■□□□□ 0.22
TSPAN4-204ENST00000397404 CD40LGP29965 261 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms