RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DPY19L2P2Q6ZN68 376 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 C17orf50Q8WW18 174 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 H1FXQ92522 213 aaKnown RBP12.18□□□□□ -0.46
SEC13-206ENST00000397102 SPTSSAQ969W0 71 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 FAM46AQ96IP4 442 aaKnown RBP12.18□□□□□ -0.46
SEC13-206ENST00000397102 MEGF9Q9H1U4 602 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 ANKRD19PQ9H560 264 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 CYB5R1Q9UHQ9 305 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 RAB21Q9UL25 225 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 TENM3Q9P273 2699 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 FAM220BPB1ANY3 271 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 AMY2BP19961 511 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 FXYD6P3P58550 94 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 GLYATL3Q5SZD4 288 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 ATPAF1Q5TC12 328 aaPredicted RBP12.17□□□□□ -0.46
SEC13-206ENST00000397102 ZBTB37Q5TC79 503 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 VTCN1Q7Z7D3 282 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 WDR86Q86TI4 376 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 OR6V1Q8N148 313 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 WFDC9Q8NEX5 89 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 OR56B2PQ8NGI1 322 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 OR8S1Q8NH09 359 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 RORBQ92753 470 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
SEC13-206ENST00000397102 TMBIM4Q9HC24 238 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 SRA1Q9HD15 236 aaKnown RBP12.17□□□□□ -0.46
SEC13-206ENST00000397102 SERTAD4Q9NUC0 356 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 ADA2Q9NZK5 511 aa12.17□□□□□ -0.46
SEC13-206ENST00000397102 SF3B6Q9Y3B4 125 aaKnown RBP12.17□□□□□ -0.46
SEC13-206ENST00000397102 MEGF11A6BM72 1044 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 CHST1O43916 411 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 IGLL1P15814 213 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 CD33P20138 364 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 ANOS1P23352 680 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 NAA10P41227 235 aaPredicted RBP12.16□□□□□ -0.46
SEC13-206ENST00000397102 BLMHQ13867 455 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 STUMQ69YW2 141 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 HCP5Q6MZN7 132 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 DPY19L4Q7Z388 723 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 PAPD5Q8NDF8 572 aaKnown RBP12.16□□□□□ -0.46
SEC13-206ENST00000397102 OR2T12Q8NG77 320 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 SEH1LQ96EE3 360 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 AJUBAQ96IF1 538 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 RSRC1Q96IZ7 334 aaKnown RBP12.16□□□□□ -0.46
SEC13-206ENST00000397102 MAP6Q96JE9 813 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 DNTTIP1Q9H147 329 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 OPA3Q9H6K4 179 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 DNAH9Q9NYC9 4486 aa12.16□□□□□ -0.46
SEC13-206ENST00000397102 LOC100653049A0A140TA62 436 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 A0A1W2PQ09 198 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 ANKRD30BLA7E2S9 258 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 TIPRLO75663 272 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 KRT34O76011 436 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 RENP00797 406 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 NPPAP01160 153 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 TROVE2P10155 538 aaKnown RBP eCLIP12.15□□□□□ -0.46
SEC13-206ENST00000397102 SELLP14151 372 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 OTX1P32242 354 aaPredicted RBP12.15□□□□□ -0.46
SEC13-206ENST00000397102 DDOSTP39656 456 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 CSNK2BP67870 215 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 IFI44LQ53G44 452 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 COQ5Q5HYK3 327 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 DRAM2Q6UX65 266 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 CCBE1Q6UXH8 406 aaPredicted RBP12.15□□□□□ -0.46
SEC13-206ENST00000397102 ZBTB46Q86UZ6 589 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 Q8N2B8 174 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 LNX2Q8N448 690 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 OR1M1Q8NGA1 313 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 OR9Q1Q8NGQ5 310 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 WIPF2Q8TF74 440 aaPredicted RBP12.15□□□□□ -0.46
SEC13-206ENST00000397102 NMNAT3Q96T66 252 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 NKX3-1Q99801 234 aaPredicted RBP12.15□□□□□ -0.46
SEC13-206ENST00000397102 OCSTAMPQ9BR26 566 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 KCNG2Q9UJ96 466 aa12.15□□□□□ -0.46
SEC13-206ENST00000397102 NKX6-3A6NJ46 265 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 HLA-DQA2P01906 255 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 FAHP16930 419 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 OMPP47874 163 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 GSK3BP49841 420 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 HABP2Q14520 560 aaPredicted RBP12.14□□□□□ -0.47
SEC13-206ENST00000397102 OR5D13Q8NGL4 314 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 ERMAPQ96PL5 475 aaPredicted RBP12.14□□□□□ -0.47
SEC13-206ENST00000397102 TMEM120AQ9BXJ8 343 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 RPRD1BQ9NQG5 326 aaKnown RBP12.14□□□□□ -0.47
SEC13-206ENST00000397102 HAO2Q9NYQ3 351 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 SLC25A10Q9UBX3 287 aaPredicted RBP12.14□□□□□ -0.47
SEC13-206ENST00000397102 CAPN7Q9Y6W3 813 aa12.14□□□□□ -0.47
SEC13-206ENST00000397102 MRASO14807 208 aa12.13□□□□□ -0.47
SEC13-206ENST00000397102 XRCC2O43543 280 aa12.13□□□□□ -0.47
SEC13-206ENST00000397102 ANGPTL7O43827 346 aa12.13□□□□□ -0.47
SEC13-206ENST00000397102 BMXP51813 675 aa12.13□□□□□ -0.47
SEC13-206ENST00000397102 CAV3P56539 151 aa12.13□□□□□ -0.47
SEC13-206ENST00000397102 CD69Q07108 199 aa12.13□□□□□ -0.47
SEC13-206ENST00000397102 DGUOKQ16854 277 aa12.13□□□□□ -0.47
SEC13-206ENST00000397102 SMARCD3Q6STE5 483 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms