RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 RIBC2Q9H4K1 309 aa13.6□□□□□ -0.23
CLTA-203ENST00000396603 TVP23BQ9NYZ1 205 aa13.6□□□□□ -0.23
CLTA-203ENST00000396603 ZAR1LA6NP61 321 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 ANKRD65E5RJM6 399 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 F5H5P2 479 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 H0YHG0 523 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 KCNAB3O43448 404 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 ENSAO43768 121 aaKnown RBP13.59□□□□□ -0.23
CLTA-203ENST00000396603 MITFO75030 526 aaPredicted RBP13.59□□□□□ -0.23
CLTA-203ENST00000396603 PTBP3O95758 552 aaKnown RBP13.59□□□□□ -0.23
CLTA-203ENST00000396603 PYCR1P32322 319 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 HNRNPA0Q13151 305 aaKnown RBP13.59□□□□□ -0.23
CLTA-203ENST00000396603 RCN1Q15293 331 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 SLC35D3Q5M8T2 416 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 SLX4IPQ5VYV7 408 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 CD276Q5ZPR3 534 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 WDR25Q64LD2 544 aaPredicted RBP13.59□□□□□ -0.23
CLTA-203ENST00000396603 SLC18B1Q6NT16 456 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 TMIGD2Q96BF3 282 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 ATF6BQ99941 703 aa13.59□□□□□ -0.23
CLTA-203ENST00000396603 SRRM5B3KS81 715 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 H0YL77 283 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 NDUFA2O43678 99 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 GLCEO94923 617 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 ACSM4P0C7M7 580 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 CDC42P60953 191 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 MAB21L1Q13394 359 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 GK2Q14410 553 aaPredicted RBP13.58□□□□□ -0.24
CLTA-203ENST00000396603 RSPO1Q2MKA7 263 aaPredicted RBP13.58□□□□□ -0.24
CLTA-203ENST00000396603 GPR157Q5UAW9 335 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 LCN1P1Q5VSP4 162 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 TMEM236Q5W0B7 351 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 PLBD1Q6P4A8 553 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 ZNF841Q6ZN19 808 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.58□□□□□ -0.24
CLTA-203ENST00000396603 FAM71F1Q96KD3 344 aaPredicted RBP13.58□□□□□ -0.24
CLTA-203ENST00000396603 RDH12Q96NR8 316 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 OR51V1Q9H2C8 321 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 H2AFY2Q9P0M6 372 aaPredicted RBP13.58□□□□□ -0.24
CLTA-203ENST00000396603 CYB5R1Q9UHQ9 305 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 POMT1Q9Y6A1 747 aa13.58□□□□□ -0.24
CLTA-203ENST00000396603 FAM183AA6NL82 134 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 P2RY10O00398 339 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 GMDSO60547 372 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 PMELP40967 661 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 ENTPD1P49961 510 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 TPTEP56180 551 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 RPS7P62081 194 aaKnown RBP13.57□□□□□ -0.24
CLTA-203ENST00000396603 KLHL12Q53G59 568 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 C12orf73Q69YU5 71 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 PGAP1Q75T13 922 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 SHFQ7M4L6 423 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 CPOQ8IVL8 374 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 GID4Q8IVV7 300 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 PACRGLQ8N7B6 248 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 BHLHE23Q8NDY6 225 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 OR10S1Q8NGN2 331 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 OR4F5Q8NH21 305 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 TMEM163Q8TC26 289 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 PITX2Q99697 317 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 VCXQ9H320 206 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 OPA3Q9H6K4 179 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 BEX1Q9HBH7 125 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 IMPAD1Q9NX62 359 aa13.57□□□□□ -0.24
CLTA-203ENST00000396603 HOXA3O43365 443 aaPredicted RBP13.56□□□□□ -0.24
CLTA-203ENST00000396603 NDUFA7O95182 113 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 GYPBP06028 91 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 GSTT1P30711 240 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 MZT1Q08AG7 82 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 MEP1BQ16820 701 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 TEX30Q5JUR7 227 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 Q6YL49 198 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 CFAP77Q6ZQR2 320 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 SPATC1Q76KD6 591 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 SPERTQ8NA61 448 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 OR51L1Q8NGJ5 315 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 OR8J1Q8NGP2 316 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 TRUB1Q8WWH5 349 aaKnown RBP13.56□□□□□ -0.24
CLTA-203ENST00000396603 SPTSSAQ969W0 71 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 ZDHHC16Q969W1 377 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 INTS14Q96SY0 518 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 FN3KRPQ9HA64 309 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 PNRC2Q9NPJ4 139 aaKnown RBP13.56□□□□□ -0.24
CLTA-203ENST00000396603 ERVK-18Q9QC07 812 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 RNF7Q9UBF6 113 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 COMMD3-BMI1R4GMX3 469 aa13.56□□□□□ -0.24
CLTA-203ENST00000396603 SLC22A31A6NKX4 558 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 F5H5K5 113 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 TNFRSF13BO14836 293 aaPredicted RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 FAM20BO75063 409 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 ZNF205O95201 554 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 GPANK1O95872 356 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 HLA-DPB1P04440 258 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 SPARCP09486 303 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 MDKP21741 143 aaPredicted RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 OTX1P32242 354 aaPredicted RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 GGT2P36268 569 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 RBMXP38159 391 aaKnown RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 FGF12P61328 243 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms