RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 KLRC4-KLRK1H3BQV0 150 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 FABP7O15540 132 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 LRP3O75074 770 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 RAB3DO95716 219 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 PRF1P14222 555 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 ZNF32P17041 273 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 ANXA7P20073 488 aaKnown RBP13.1□□□□□ -0.31
CBX3-202ENST00000396386 PCBD1P61457 104 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 ZNF774Q6NX45 483 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 GALNTL5Q7Z4T8 443 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 ZNF584Q8IVC4 421 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
CBX3-202ENST00000396386 PNLDC1Q8NA58 520 aaKnown RBP13.1□□□□□ -0.31
CBX3-202ENST00000396386 CHST4Q8NCG5 386 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 OR51S1Q8NGJ8 323 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 OR8S1Q8NH09 359 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 SSC4DQ8WTU2 575 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 DVL3Q92997 716 aaPredicted RBP13.1□□□□□ -0.31
CBX3-202ENST00000396386 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 CHST5Q9GZS9 411 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 ZMAT3Q9HA38 289 aaKnown RBP13.1□□□□□ -0.31
CBX3-202ENST00000396386 PTTG3PQ9NZH4 202 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 KLK13Q9UKR3 277 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 MCTS1Q9ULC4 181 aaKnown RBP13.1□□□□□ -0.31
CBX3-202ENST00000396386 SPTBN4Q9H254 2564 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 IGKV1-9A0A0C4DH69 117 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 OR6C6A6NF89 314 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 ARGFXA6NJG6 315 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 SNRPGP15A8MWD9 76 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 PYCARD-AS1I3L0S3 204 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 CREBL2O60519 120 aaPredicted RBP13.09□□□□□ -0.31
CBX3-202ENST00000396386 FCER2P06734 321 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 CD46P15529 392 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 FAHP16930 419 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 HTR5AP47898 357 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 HYAL4Q2M3T9 481 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 SFRP5Q5T4F7 317 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 ATP1A1-AS1Q5TC04 95 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 SLC16A14Q7RTX9 510 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.09□□□□□ -0.31
CBX3-202ENST00000396386 RNF144BQ7Z419 303 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 FJX1Q86VR8 437 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 DTX1Q86Y01 620 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 KCNG3Q8TAE7 436 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 CMBLQ96DG6 245 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 PRRX2Q99811 253 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 LINC00470Q9BZP3 86 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 RANBP3Q9H6Z4 567 aaPredicted RBP13.09□□□□□ -0.31
CBX3-202ENST00000396386 ZNF69Q9UC07 566 aa13.09□□□□□ -0.31
CBX3-202ENST00000396386 RIF1Q5UIP0 2472 aaKnown RBP13.09□□□□□ -0.31
CBX3-202ENST00000396386 SPAARA0A1B0GVQ0 90 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 ZNF736B4DX44 427 aaPredicted RBP13.08□□□□□ -0.32
CBX3-202ENST00000396386 MRPL33O75394 65 aaKnown RBP13.08□□□□□ -0.32
CBX3-202ENST00000396386 ALX3O95076 343 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 RRADP55042 308 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 ZP1P60852 638 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 FAM189A2Q15884 450 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 NDUFA5Q16718 116 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 ZNF626Q68DY1 528 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 TRAPPC6BQ86SZ2 158 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 OR10R2Q8NGX6 335 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 C1orf147Q96MC9 270 aaPredicted RBP13.08□□□□□ -0.32
CBX3-202ENST00000396386 TMEM59Q9BXS4 323 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 OR2H1Q9GZK4 316 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 ELF5Q9UKW6 265 aaPredicted RBP13.08□□□□□ -0.32
CBX3-202ENST00000396386 PIGLQ9Y2B2 252 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 TIMM10BQ9Y5J6 103 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 WIPF3A6NGB9 483 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 DHRS7CA6NNS2 312 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 CDRT15L2A8MXV6 281 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 CDC14BO60729 498 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 FARS2O95363 451 aaKnown RBP13.08□□□□□ -0.32
CBX3-202ENST00000396386 MPIG6BO95866 241 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 CD74P04233 296 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 CHRM2P08172 466 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 MELTFP08582 738 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 CPN1P15169 458 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 PPIAP62937 165 aaKnown RBP13.08□□□□□ -0.32
CBX3-202ENST00000396386 BCL2A1Q16548 175 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 KRTAP27-1Q3LI81 207 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 NRN1LQ496H8 165 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 CDNFQ49AH0 187 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 TSPO2Q5TGU0 170 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 SEZ6L2Q6UXD5 910 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 CHMP1BQ7LBR1 199 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 AKR7LQ8NHP1 331 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 ZNF436Q9C0F3 470 aaPredicted RBP13.08□□□□□ -0.32
CBX3-202ENST00000396386 WNT5BQ9H1J7 359 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 EXO5Q9H790 373 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 NPDC1Q9NQX5 325 aaPredicted RBP13.08□□□□□ -0.32
CBX3-202ENST00000396386 PARPBPQ9NWS1 579 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 UPB1Q9UBR1 384 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 NPTNQ9Y639 398 aa13.08□□□□□ -0.32
CBX3-202ENST00000396386 A6NL46 340 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 M0QYG6 137 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 AMY2AP04746 511 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 RLN1P04808 185 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 GSTT2P0CG29 244 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms