RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 Q6ZVH6 145 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 GRINAQ7Z429 371 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 OR56B2PQ8NGI1 322 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 OR2G3Q8NGZ4 309 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 TVP23CQ96ET8 276 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 MEGF9Q9H1U4 602 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 NRIP3Q9NQ35 241 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 CENPMQ9NSP4 180 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 FTSJ1Q9UET6 329 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 AK3Q9UIJ7 227 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 TRAV27A0A087WT01 109 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 A8MWP6 167 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 F13BP05160 661 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 HNRNPA1P09651 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
NDE1-202ENST00000396355 RAB40ALP0C0E4 278 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 H2AFB1P0C5Y9 115 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 CEACAM1P13688 526 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 RAC2P15153 192 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 AGAP20933 346 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 XCR1P46094 333 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 GABRA4P48169 554 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 NCBP2P52298 156 aaKnown RBP eCLIP7.59□□□□□ -1.19
NDE1-202ENST00000396355 PFN3P60673 137 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 GXYLT1Q4G148 440 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 MYPOPQ86VE0 399 aaPredicted RBP7.59□□□□□ -1.19
NDE1-202ENST00000396355 LILRA3Q8N6C8 439 aaPredicted RBP7.59□□□□□ -1.19
NDE1-202ENST00000396355 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 OR6X1Q8NH79 312 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 FNDC9Q8TBE3 224 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 ASB11Q8WXH4 323 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 RAB40AQ8WXH6 277 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 CDS1Q92903 461 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 NTNG2Q96CW9 530 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 SPACA7Q96KW9 195 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 TMPRSS13Q9BYE2 586 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 KCNK15Q9H427 330 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 RYDENQ9NUL5 291 aaKnown RBP7.59□□□□□ -1.19
NDE1-202ENST00000396355 OSGIN2Q9Y236 505 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 ZFYVE26Q68DK2 2539 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 TRANK1O15050 2925 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 PLXND1Q9Y4D7 1925 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 ZNF850A8MQ14 1090 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 KDM4EB2RXH2 506 aaPredicted RBP7.59□□□□□ -1.19
NDE1-202ENST00000396355 IL1RNP18510 177 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 PRPH2P23942 346 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 RPL12P30050 165 aaKnown RBP7.59□□□□□ -1.19
NDE1-202ENST00000396355 TDGF1P3P51864 188 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 SLC26A5P58743 744 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 FXYD4P59646 89 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 PPP1R1AQ13522 171 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 SLC17A1Q14916 467 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 TAF9Q16594 264 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 CCSMST1Q4G0I0 132 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 GGTA1PQ4G0N0 100 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 MEX3BQ6ZN04 569 aaKnown RBP7.59□□□□□ -1.19
NDE1-202ENST00000396355 PRICKLE2Q7Z3G6 844 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.59□□□□□ -1.19
NDE1-202ENST00000396355 SLC26A10Q8NG04 563 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 OR6T1Q8NGN1 323 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 OR4A4PQ8NGN8 299 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 PIK3IP1Q96FE7 263 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 LMLNQ96KR4 655 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 TMEM9BQ9NQ34 198 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 SLC35D1Q9NTN3 355 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 SEMA4GQ9NTN9 838 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 ZDHHC3Q9NYG2 299 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 PRODH2Q9UF12 536 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.19
NDE1-202ENST00000396355 INSL5Q9Y5Q6 135 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 WNT6Q9Y6F9 365 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 WSB1Q9Y6I7 421 aa7.59□□□□□ -1.19
NDE1-202ENST00000396355 ZNF816-ZNF321PA0A0X1KG74 233 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 NTN1O95631 604 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 NUDT14O95848 222 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 BPNT1O95861 308 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 CD46P15529 392 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 FUT1P19526 365 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 AMY2BP19961 511 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 VIPR2P41587 438 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 LIM2P55344 173 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 IL10RAQ13651 578 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 PNLIPRP3Q17RR3 467 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 PGGHGQ32M88 737 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 ARSIQ5FYB1 569 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 TPTE2P1Q5T6R2 138 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 TCTN3Q6NUS6 607 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 ZNF774Q6NX45 483 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 TSEN54Q7Z6J9 526 aaKnown RBP7.59□□□□□ -1.2
NDE1-202ENST00000396355 ATOH7Q8N100 152 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 CBARPQ8N350 705 aaPredicted RBP7.59□□□□□ -1.2
NDE1-202ENST00000396355 FAM160A2Q8N612 972 aaPredicted RBP7.59□□□□□ -1.2
NDE1-202ENST00000396355 SIRT6Q8N6T7 355 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 ABHD3Q8WU67 409 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 TMEM106AQ96A25 262 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 HIST1H2BLQ99880 126 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 LPAR5Q9H1C0 372 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 NCOR1P1Q9H4R4 102 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 TUBA4BQ9H853 241 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 LPAR2Q9HBW0 351 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 NAGKQ9UJ70 344 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms