RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 RRNAD1Q96FB5 475 aaKnown RBP16.66■□□□□ 0.26
CBX1-202ENST00000393408 CYYR1Q96J86 154 aa16.66■□□□□ 0.26
CBX1-202ENST00000393408 CDC6Q99741 560 aa16.66■□□□□ 0.26
CBX1-202ENST00000393408 ZNF416Q9BWM5 594 aa16.66■□□□□ 0.26
CBX1-202ENST00000393408 TMEM59Q9BXS4 323 aa16.66■□□□□ 0.26
CBX1-202ENST00000393408 PCED1AQ9H1Q7 454 aa16.66■□□□□ 0.26
CBX1-202ENST00000393408 SDHAF3Q9NRP4 125 aa16.66■□□□□ 0.26
CBX1-202ENST00000393408 CEP192Q8TEP8 1941 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 H0YIZ8 118 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 ABCD4O14678 606 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 TPT1P13693 172 aaKnown RBP16.65■□□□□ 0.26
CBX1-202ENST00000393408 IL32P24001 234 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 MSX1P28360 303 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 PTGDSP41222 190 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 NPY4RP50391 375 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 GABREP78334 506 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 PNLIPRP3Q17RR3 467 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 PABPC1L2AQ5JQF8 200 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 ARMC10Q8N2F6 343 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 GTPBP8Q8N3Z3 284 aaPredicted RBP16.65■□□□□ 0.26
CBX1-202ENST00000393408 SLC38A9Q8NBW4 561 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 FAM71F1Q96KD3 344 aaPredicted RBP16.65■□□□□ 0.26
CBX1-202ENST00000393408 SLC7A5P2Q9GIP4 190 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 SLC6A15Q9H2J7 730 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 PNRC2Q9NPJ4 139 aaKnown RBP16.65■□□□□ 0.26
CBX1-202ENST00000393408 CYTL1Q9NRR1 136 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 TMEM100Q9NV29 134 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 ASH2LQ9UBL3 628 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 A0A1W2PP11 408 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 TMEM218A2RU14 115 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 SFT2D2O95562 160 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 OPN1LWP04000 364 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 CCL1P22362 96 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 NAAAQ02083 359 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 SMAD2Q15796 467 aaKnown RBP16.65■□□□□ 0.26
CBX1-202ENST00000393408 SLC25A45Q8N413 288 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 ESX1Q8N693 406 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 ZSCAN4Q8NAM6 433 aaPredicted RBP16.65■□□□□ 0.26
CBX1-202ENST00000393408 OCSTAMPQ9BR26 566 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 PCDHB16Q9NRJ7 776 aa16.65■□□□□ 0.26
CBX1-202ENST00000393408 IGLV3-32A0A0A0MS00 114 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 MFNGO00587 321 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 SMAD4Q13485 552 aaKnown RBP16.64■□□□□ 0.25
CBX1-202ENST00000393408 CARD17Q5XLA6 110 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 BAP18Q8IXM2 172 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 SSC4DQ8WTU2 575 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 ROBO4Q8WZ75 1007 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 WDR77Q9BQA1 342 aaPredicted RBP16.64■□□□□ 0.25
CBX1-202ENST00000393408 A0A0B4J2A0 478 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 ZNF814B7Z6K7 855 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 RER1O15258 196 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 HCKP08631 526 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 SRFP11831 508 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 CD79AP11912 226 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 CLEC18BQ6UXF7 455 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 RABEPKQ7Z6M1 372 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 PEG10Q86TG7 708 aaKnown RBP16.64■□□□□ 0.25
CBX1-202ENST00000393408 OR5T2Q8NGG2 359 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 OR56B1Q8NGI3 324 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 ARHGAP5-AS1Q96IT6 56 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 RAB18Q9NP72 206 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 SLC39A1Q9NY26 324 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 SHPKQ9UHJ6 478 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 PURGQ9UJV8 347 aaKnown RBP16.64■□□□□ 0.25
CBX1-202ENST00000393408 FLVCR1Q9Y5Y0 555 aa16.64■□□□□ 0.25
CBX1-202ENST00000393408 A0A1W2PNR3 127 aa16.63■□□□□ 0.25
CBX1-202ENST00000393408 COL19A1Q14993 1142 aa16.63■□□□□ 0.25
CBX1-202ENST00000393408 SLC9A3R2Q15599 337 aa16.63■□□□□ 0.25
CBX1-202ENST00000393408 SGCAQ16586 387 aa16.63■□□□□ 0.25
CBX1-202ENST00000393408 NKAIN1Q4KMZ8 207 aa16.63■□□□□ 0.25
CBX1-202ENST00000393408 OR6X1Q8NH79 312 aa16.63■□□□□ 0.25
CBX1-202ENST00000393408 WIF1Q9Y5W5 379 aa16.63■□□□□ 0.25
CBX1-202ENST00000393408 ADAP1O75689 374 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 CRTAPO75718 401 aaPredicted RBP16.62■□□□□ 0.25
CBX1-202ENST00000393408 LYL1P12980 280 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 FPR2P25090 351 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 SUPT4H1P63272 117 aaKnown RBP16.62■□□□□ 0.25
CBX1-202ENST00000393408 KCNMB1Q16558 191 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 CCDC157Q569K6 752 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 DOK3Q7L591 496 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 OR10G3Q8NGC4 313 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 OR5H2Q8NGV7 314 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 PAQR8Q8TEZ7 354 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 B3GALT1Q9Y5Z6 326 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 IGKV1-9A0A0C4DH69 117 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 ADCYAP1P18509 176 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 AKR1C2P52895 323 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 AKR1C1Q04828 323 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 FAM57BQ71RH2 274 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 LHFPL1Q86WI0 220 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 OR5B2Q96R09 309 aa16.62■□□□□ 0.25
CBX1-202ENST00000393408 TSNAXQ99598 290 aaKnown RBP16.62■□□□□ 0.25
CBX1-202ENST00000393408 RTBDNQ9BSG5 229 aaPredicted RBP16.62■□□□□ 0.25
CBX1-202ENST00000393408 GPR31O00270 319 aa16.61■□□□□ 0.25
CBX1-202ENST00000393408 NDUFA2O43678 99 aa16.61■□□□□ 0.25
CBX1-202ENST00000393408 TIAF1O95411 115 aa16.61■□□□□ 0.25
CBX1-202ENST00000393408 ACTL6AO96019 429 aa16.61■□□□□ 0.25
CBX1-202ENST00000393408 PI3P19957 117 aa16.61■□□□□ 0.25
CBX1-202ENST00000393408 CBX5P45973 191 aa16.61■□□□□ 0.25
CBX1-202ENST00000393408 FAM189A2Q15884 450 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms