RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 FAM3DQ96BQ1 224 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 WBP1Q96G27 269 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 ZNF799Q96GE5 643 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 CNTD2Q9H8S5 307 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 FOXJ3Q9UPW0 622 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 SMG1Q96Q15 3661 aaKnown RBP13.07□□□□□ -0.32
MKS1-202ENST00000393119 A0A1B0GVI7 797 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 CEACAM4O75871 244 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 ACTL6AO96019 429 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 DCTDP32321 178 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 BAMBIQ13145 260 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 CLLU1Q5K131 121 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 OR11H4Q8NGC9 324 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 RFT1Q96AA3 541 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 GHITMQ9H3K2 345 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 ZMAT3Q9HA38 289 aaKnown RBP13.07□□□□□ -0.32
MKS1-202ENST00000393119 KLK11Q9UBX7 282 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 RHBDD3Q9Y3P4 386 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 TMEM272A0A1B0GTI8 110 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 A0A1W2PR80 420 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 MEIS3P1A6NDR6 274 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 SLC22A20A6NK97 555 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 NR2C1P13056 603 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 CCNOP22674 350 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 HTR5AP47898 357 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 PTH2RP49190 550 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 GRB2P62993 217 aaKnown RBP13.06□□□□□ -0.32
MKS1-202ENST00000393119 CTAG1AP78358 180 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 FCN2Q15485 313 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 TSC22D1Q15714 1073 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 SLC36A2Q495M3 483 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 FAM166AQ6J272 317 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 YIPF5Q969M3 257 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 FAM46BQ96A09 425 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 TMEM45BQ96B21 275 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 SGK3Q96BR1 496 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 TRIB1Q96RU8 372 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 BCO1Q9HAY6 547 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 CKLFQ9UBR5 152 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 IGF2RP11717 2491 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 A0A0A6YYJ9 748 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 TRAV17A0A0B4J275 112 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 IGKV1-9A0A0C4DH69 117 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 FAHP16930 419 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 CRYGSP22914 178 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 BTCP35070 178 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 GUCA2AQ02747 115 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 RAB11BQ15907 218 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 AANATQ16613 207 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 MOGAT2Q3SYC2 334 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 HIKESHIQ53FT3 197 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 PABPC1L2AQ5JQF8 200 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 MCEMP1Q8IX19 187 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 OR11H7Q8NGC8 314 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 APH1AQ96BI3 265 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 OR2H1Q9GZK4 316 aa13.06□□□□□ -0.32
MKS1-202ENST00000393119 CIB4A0PJX0 185 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 SLC17A2O00624 439 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 CST2P09228 141 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 MMP7P09237 267 aaPredicted RBP13.05□□□□□ -0.32
MKS1-202ENST00000393119 CPN1P15169 458 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 HTR2CP28335 458 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 ART1P52961 327 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 PYHIN1Q6K0P9 492 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 FAAP20Q6NZ36 180 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 FAM122CQ6P4D5 195 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 LYPD6Q86Y78 171 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 ZNF100Q8IYN0 542 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 OR1M1Q8NGA1 313 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 OR5D18Q8NGL1 313 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 OR14K1Q8NGZ2 314 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 OR52I2Q8NH67 350 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 OR1F12Q8NHA8 337 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 RANBP3Q9H6Z4 567 aaPredicted RBP13.05□□□□□ -0.32
MKS1-202ENST00000393119 C12orf4Q9NQ89 552 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 SLC17A5Q9NRA2 495 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 UPB1Q9UBR1 384 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 A0A1W2PP11 408 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 I3L521 148 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 TPPPO94811 219 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 HOXD4P09016 255 aaPredicted RBP13.05□□□□□ -0.32
MKS1-202ENST00000393119 ACKR3P25106 362 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 AGTR1P30556 359 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 OTX1P32242 354 aaPredicted RBP13.05□□□□□ -0.32
MKS1-202ENST00000393119 GPR176Q14439 515 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 C3P1Q6ZMU1 363 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 OR5AS1Q8N127 324 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
MKS1-202ENST00000393119 MS4A3Q96HJ5 214 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 MGAT4AQ9UM21 535 aa13.05□□□□□ -0.32
MKS1-202ENST00000393119 LOC100509620A0A075B734 347 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 ZNF587BE7ETH6 402 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 UBL3O95164 117 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 LCATP04180 440 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 CALCBP10092 127 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 RRASP10301 218 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 ZNF20P17024 532 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 FSTP19883 344 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 GRK1Q15835 563 aa13.04□□□□□ -0.32
MKS1-202ENST00000393119 TMEM255AQ5JRV8 349 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms