RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 SNAI3Q3KNW1 292 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 HES5Q5TA89 166 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 CRYBG3Q68DQ2 2970 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 DNAAF1Q8NEP3 725 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 OR1J2Q8NGS2 313 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 TRMT10AQ8TBZ6 339 aaKnown RBP11.75□□□□□ -0.53
PTN-202ENST00000393083 MARVELD3Q96A59 401 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 FGGYQ96C11 551 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 WFIKKN1Q96NZ8 548 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 SLC30A2Q9BRI3 323 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 SOX7Q9BT81 388 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 OR10A4Q9H209 315 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 ZCCHC4Q9H5U6 513 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 KCNN3Q9UGI6 736 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 ADAM30Q9UKF2 790 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 ANKHD1Q8IWZ3 2542 aaKnown RBP11.75□□□□□ -0.53
PTN-202ENST00000393083 CIB4A0PJX0 185 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 AIPO00170 330 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 LYZL6O75951 148 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 IGLV3-1P01715 115 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 LCATP04180 440 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 COX5BP10606 129 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 ZNF12P17014 697 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 IGFBP3P17936 291 aaPredicted RBP11.75□□□□□ -0.53
PTN-202ENST00000393083 RAB1AP62820 205 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 ZNF45Q02386 682 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 C16orf87Q6PH81 154 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 PARP16Q8N5Y8 322 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 CPEB3Q8NE35 698 aaKnown RBP11.75□□□□□ -0.53
PTN-202ENST00000393083 OR52H1Q8NGJ2 320 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 FAM222BQ8WU58 562 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 ADAT3Q96EY9 351 aaPredicted RBP11.75□□□□□ -0.53
PTN-202ENST00000393083 LYZL4Q96KX0 146 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 SP140LQ9H930 580 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 PLEKHA1Q9HB21 404 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 ABRACLQ9P1F3 81 aa11.75□□□□□ -0.53
PTN-202ENST00000393083 CELSR2Q9HCU4 2923 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 A0A0B4J203 849 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 IFITM5A6NNB3 132 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 PAHP00439 452 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 SNRPBP14678 240 aaKnown RBP11.74□□□□□ -0.53
PTN-202ENST00000393083 GNALP38405 381 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 PLP2Q04941 152 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 GSG1Q2KHT4 349 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 BHLHA15Q7RTS1 189 aaPredicted RBP11.74□□□□□ -0.53
PTN-202ENST00000393083 STEAP2Q8NFT2 490 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 ZNF671Q8TAW3 534 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 S100PBPQ96BU1 408 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 DIRAS2Q96HU8 199 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 ACTR6Q9GZN1 396 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 PALMDQ9NP74 551 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 NDRG3Q9UGV2 375 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 V9GYH0 126 aa11.74□□□□□ -0.53
PTN-202ENST00000393083 A6NIN4 97 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 FAM25AB3EWG3 89 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 FAM25CB3EWG5 89 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 FAM25GB3EWG6 89 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 TMEM127O75204 238 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 THBDP07204 575 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 PRF1P14222 555 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 PPP3CBP16298 524 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 STOMP27105 288 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 CD40LGP29965 261 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 PSMD7P51665 324 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 PPP5CP53041 499 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 UBE2NP61088 152 aaKnown RBP11.73□□□□□ -0.53
PTN-202ENST00000393083 DAZAP2Q15038 168 aaPredicted RBP11.73□□□□□ -0.53
PTN-202ENST00000393083 MDP1Q86V88 176 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 SERPINA12Q8IW75 414 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 SAMD12Q8N8I0 201 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 C1orf162Q8NEQ5 155 aaPredicted RBP11.73□□□□□ -0.53
PTN-202ENST00000393083 OR51A2Q8NGJ7 313 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 OR5H6Q8NGV6 325 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 OR14K1Q8NGZ2 314 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 LGALS14Q8TCE9 139 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 C14orf79Q96F83 325 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 REEP6Q96HR9 211 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 B3GNT2Q9NY97 397 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 V9GYS6 101 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 UNC79Q9P2D8 2635 aa11.73□□□□□ -0.53
PTN-202ENST00000393083 LOC100509620A0A075B734 347 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 FAM221AA4D161 298 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 DHRS3O75911 302 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 CCNOP22674 350 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 IL32P24001 234 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 HOXC12P31275 282 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 APLNRP35414 380 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 DDOSTP39656 456 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 SPOCK1Q08629 439 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 GABRA6Q16445 453 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 GLYATL3Q5SZD4 288 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 GLT8D1Q68CQ7 371 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 CNIH2Q6PI25 160 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 FAM131AQ6UXB0 335 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 ZNF584Q8IVC4 421 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 NKAIN3Q8N8D7 197 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 PLPP7Q8NBV4 271 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 CCDC54Q8NEL0 328 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 OR1M1Q8NGA1 313 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 OR2AE1Q8NHA4 323 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms