RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 ZNF718Q3SXZ3 478 aa11.33□□□□□ -0.6
CLTC-202ENST00000393043 DMKNQ6E0U4 476 aaPredicted RBP11.33□□□□□ -0.6
CLTC-202ENST00000393043 PWWP2BQ6NUJ5 590 aa11.33□□□□□ -0.6
CLTC-202ENST00000393043 C1orf210Q8IVY1 113 aa11.33□□□□□ -0.6
CLTC-202ENST00000393043 RDH5Q92781 318 aa11.33□□□□□ -0.6
CLTC-202ENST00000393043 CHST6Q9GZX3 395 aa11.33□□□□□ -0.6
CLTC-202ENST00000393043 CES1P1Q9UKY3 287 aa11.33□□□□□ -0.6
CLTC-202ENST00000393043 FCGR2CP31995 323 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 RPL35P42766 123 aaKnown RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 HAAOP46952 286 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 RNPS1Q15287 305 aaKnown RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 ACER2Q5QJU3 275 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 CST9LP1Q5W188 147 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 OR52W1Q6IF63 320 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 AKR7LQ8NHP1 331 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 POC1BQ8TC44 478 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 BTF3L4Q96K17 158 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 MTCH2Q9Y6C9 303 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 NUP214P35658 2090 aaPredicted RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 TUBAL3A6NHL2 446 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 EFSO43281 561 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 HPNP05981 417 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 PEBP1P30086 187 aaKnown RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 SRD5A2P31213 254 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 INSM1Q01101 510 aaPredicted RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 OR2A2Q6IF42 318 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 GLDNQ6ZMI3 551 aaPredicted RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 GNRHR2Q96P88 292 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 ZFP64Q9NPA5 681 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 PUS1Q9Y606 427 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLTC-202ENST00000393043 ZNF354AO60765 605 aaPredicted RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 NDUFB6O95139 128 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 RFC3P40938 356 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 SNRPNP63162 240 aaKnown RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 DHODHQ02127 395 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 ANKRD16Q6P6B7 361 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 FAM122BQ7Z309 247 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 CATSPERDQ86XM0 798 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 ZNF768Q9H5H4 540 aaKnown RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 E5RGE8 158 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
CLTC-202ENST00000393043 KCNRGQ8N5I3 272 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 C17orf47Q8NEP4 570 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 MCHR2Q969V1 340 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 MTFP1Q9UDX5 166 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 NSG2Q9Y328 171 aa11.32□□□□□ -0.6
CLTC-202ENST00000393043 OGG1O15527 345 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 AQP8O94778 261 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 GLRA1P23415 457 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 SLC37A1P57057 533 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 GLCCI1Q86VQ1 547 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 SLC35G3Q8N808 338 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 GNPNAT1Q96EK6 184 aaPredicted RBP11.31□□□□□ -0.6
CLTC-202ENST00000393043 TRGV5A0A0B4J1U4 118 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 TRAV17A0A0B4J275 112 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 A0A0U1RQK1 487 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 MKRN2OSH3BPM6 223 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 LGALS8O00214 317 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 CHRNB4P30926 498 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 IRF3Q14653 427 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 TMEM128Q5BJH2 165 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 BATF2Q8N1L9 274 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 ZDHHC22Q8N966 263 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 OR2G3Q8NGZ4 309 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 M1APQ8TC57 530 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 H1FXQ92522 213 aaKnown RBP11.31□□□□□ -0.6
CLTC-202ENST00000393043 NEURL2Q9BR09 285 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 C1QTNF6Q9BXI9 259 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 SERTAD4Q9NUC0 356 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 RGPD3A6NKT7 1758 aaPredicted RBP11.31□□□□□ -0.6
CLTC-202ENST00000393043 DHRS3O75911 302 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 FZD5Q13467 585 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 CD226Q15762 336 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 DEFB109BQ30KR1 87 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 NIPSNAP3BQ9BS92 247 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 SLC52A3Q9NQ40 469 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 LIN7CQ9NUP9 197 aaKnown RBP11.31□□□□□ -0.6
CLTC-202ENST00000393043 CACNA1CQ13936 2221 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 SIRPB1O00241 398 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 CTLA4P16410 223 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 UBE2MP61081 183 aaKnown RBP11.31□□□□□ -0.6
CLTC-202ENST00000393043 GALNT16Q8N428 558 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 CISD2Q8N5K1 135 aaKnown RBP11.31□□□□□ -0.6
CLTC-202ENST00000393043 OR6X1Q8NH79 312 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 SARGQ9BW04 601 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 DUSP15Q9H1R2 295 aaPredicted RBP11.31□□□□□ -0.6
CLTC-202ENST00000393043 C19orf12Q9NSK7 152 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 UFSP2Q9NUQ7 469 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 PLEKHB1Q9UF11 243 aaPredicted RBP11.31□□□□□ -0.6
CLTC-202ENST00000393043 OR5V1Q9UGF6 321 aa11.31□□□□□ -0.6
CLTC-202ENST00000393043 A0A1B0GTQ1 180 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 RPS10-NUDT3A0A1W2PQS6 291 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 ENSAO43768 121 aaKnown RBP11.3□□□□□ -0.6
CLTC-202ENST00000393043 APOA2P02652 100 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 OR8U8P0C7N1 319 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 IL9P15248 144 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 ARL3P36405 182 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms