RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZMPSTE24O75844 475 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 LYPLA2O95372 231 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CLDN9O95484 217 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TNNC2P02585 160 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 FGGP02679 453 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SERPINA5P05154 406 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CT62P0C5K7 136 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 HSPD1P10809 573 aaKnown RBP1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PMCHP20382 165 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 NPR2P20594 1047 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TBXA2RP21731 343 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 ME2P23368 584 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 DTYMKP23919 212 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 DCKP27707 260 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 GABRR2P28476 465 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 GTF2E2P29084 291 aaKnown RBP1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SERPINB1P30740 379 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CALCRP30988 508 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PCK1P35558 622 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TGFBR2P37173 567 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 COILP38432 576 aaPredicted RBP1.44□□□□□ -2.18
TRAV40-201ENST00000390467 MAGEA6P43360 314 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 UBE2AP49459 152 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 DUSP3P51452 185 aaPredicted RBP1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PLA2G16P53816 162 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TMEM33P57088 247 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 RAB10P61026 200 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PSME3P61289 254 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 ERVK-25P63136 954 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 KCNJ2P63252 427 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CCL7P80098 99 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 OGDHQ02218 1023 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 BNIP2Q12982 314 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 MESDQ14696 234 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CYTH1Q15438 398 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TSC22D1Q15714 1073 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PRSS8Q16651 343 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 UBE2SQ16763 222 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 GUK1Q16774 197 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TRIM16LQ309B1 348 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SLC36A2Q495M3 483 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 COX19Q49B96 90 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CCDC58Q4VC31 144 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 AKIRIN2Q53H80 203 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TEX30Q5JUR7 227 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 BRMS1LQ5PSV4 323 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SYPL2Q5VXT5 272 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 METTL21CQ5VZV1 264 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 APOBEC3HQ6NTF7 200 aaKnown RBP1.44□□□□□ -2.18
TRAV40-201ENST00000390467 REEP3Q6NUK4 255 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 LYPD2Q6UXB3 125 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TMPRSS11AQ6ZMR5 421 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 C19orf35Q6ZS72 473 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SHISA6Q6ZSJ9 500 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PGAP1Q75T13 922 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CALHM3Q86XJ0 350 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TMEM25Q86YD3 366 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CRLF3Q8IUI8 442 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 APRG1Q8IVJ8 170 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 FUNDC1Q8IVP5 155 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PRSS58Q8IYP2 241 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 FAM71AQ8IYT1 594 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 HS3ST5Q8IZT8 346 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CYP4Z2PQ8N1L4 340 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 C2orf73Q8N5S3 287 aaPredicted RBP1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CATSPER1Q8NEC5 780 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 B3GNT7Q8NFL0 401 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 OR4F15Q8NGB8 312 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 OR5B17Q8NGF7 314 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 OR2D3Q8NGH3 330 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 OR52N1Q8NH53 320 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 OR2V1Q8NHB1 315 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 OR10J5Q8NHC4 309 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SYNPRQ8TBG9 265 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 LGALS14Q8TCE9 139 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TCP10LQ8TDR4 215 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CXorf40AQ8TE69 158 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 AP3S1Q92572 193 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 HGDQ93099 445 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 LRRC58Q96CX6 371 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 DGCR14Q96DF8 476 aaKnown RBP1.44□□□□□ -2.18
TRAV40-201ENST00000390467 RNF170Q96K19 258 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 RSG1Q9BU20 258 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 ZNF426Q9BUY5 554 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 BCL2L14Q9BZR8 327 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 GBA3Q9H227 469 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 OR51B5Q9H339 312 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 ANKRD19PQ9H560 264 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 ASB7Q9H672 318 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 ANKHQ9HCJ1 492 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 ASCL3Q9NQ33 180 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 POLE4Q9NR33 117 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PLEKHJ1Q9NW61 149 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SIGLEC8Q9NYZ4 499 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 MAT2BQ9NZL9 334 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 GNG12Q9UBI6 72 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 MMACHCQ9Y4U1 282 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TIMM10BQ9Y5J6 103 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PEX16Q9Y5Y5 336 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 FRMPD3Q5JV73 1810 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms