RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 C1QL3Q5VWW1 255 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 SHEQ5VZ18 495 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 CMBLQ96DG6 245 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 PLEKHA3Q9HB20 300 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 SF3B6Q9Y3B4 125 aaKnown RBP14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 ZNF354AO60765 605 aaPredicted RBP14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 DFFBO76075 338 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 CTXN2P0C2S0 81 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 SPEM1Q8N4L4 309 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 IFI44Q8TCB0 444 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 REEP6Q96HR9 211 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 CYB5R1Q9UHQ9 305 aa14.45□□□□□ -0.1
PTPRN2-201ENST00000389413 A0A1W2PPV4 95 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 OR6C65A6NJZ3 312 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 UBE2ZQ9H832 354 aaPredicted RBP14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 ZNF223Q9UK11 482 aaPredicted RBP14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 PCDHGA9Q9Y5G4 932 aaKnown RBP14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 IGHV3-15A0A0B4J1V0 119 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 GALNSP34059 522 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 LGALSLQ3ZCW2 172 aaPredicted RBP14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 CADM4Q8NFZ8 388 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 OR1S2Q8NGQ3 325 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 GPX8Q8TED1 209 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 TM4SF19Q96DZ7 209 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 H7C1Q1 480 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 NME2P1O60361 137 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 ADRA2CP18825 462 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 ETFDHQ16134 617 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 LINC00696Q6ZRV3 163 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 PSME4Q14997 1843 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 MPZL1O95297 269 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 AADACP22760 399 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 RBMS3Q6XE24 437 aaKnown RBP14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 CARFQ8N187 725 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 BATF2Q8N1L9 274 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 RTN4IP1Q8WWV3 396 aaPredicted RBP14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 APH1AQ96BI3 265 aa14.44□□□□□ -0.1
PTPRN2-201ENST00000389413 FAM221AA4D161 298 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 HSD17B6O14756 317 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 LRP3O75074 770 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 OR13C7P0DN81 318 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 HIST1H1DP16402 221 aaKnown RBP14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 SKP2Q13309 424 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 BHLHE23Q8NDY6 225 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 WBP1LQ9NX94 342 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 CXCL13O43927 109 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 CD1AP06126 327 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 RRASP10301 218 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 FPR2P25090 351 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 PIGPP57054 158 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 GGTLC2Q14390 218 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 UQCC3Q6UW78 93 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 SDSLQ96GA7 329 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 PRMT8Q9NR22 394 aaPredicted RBP14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 A0A1W2PQD3 144 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 NXPH2O95156 264 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 HPNP05981 417 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 F2RL1P55085 397 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 TAS2R30P59541 319 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 ATPAF1Q5TC12 328 aaPredicted RBP14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 OR52N4Q8NGI2 321 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 CCDC74BQ96LY2 380 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 CNTD2Q9H8S5 307 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 NEUROG3Q9Y4Z2 214 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 SLCO1B1Q9Y6L6 691 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 A0A0G2JMZ2 1700 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 LRRC37A2A6NM11 1700 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 SIP14410 1827 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 TRAV8-7A0A075B6U6 113 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 C9orf170A2RU37 121 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 SLC37A1P57057 533 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 SFT2D1Q8WV19 159 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 SLC39A9Q9NUM3 307 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 MYOTQ9UBF9 498 aa14.43□□□□□ -0.1
PTPRN2-201ENST00000389413 A0A1W2PQF6 199 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 LRP5LA4QPB2 252 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 RER1O15258 196 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 XRCC2O43543 280 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 RPA2P15927 270 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 TMEM182Q6ZP80 229 aaPredicted RBP14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 FRZBQ92765 325 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 PURGQ9UJV8 347 aaKnown RBP14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 CBR3O75828 277 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 TUSC2O75896 110 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 CLDN1O95832 211 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 H2AFB1P0C5Y9 115 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 ADAM5Q6NVV9 412 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 SPRED2Q7Z698 418 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 TDHQ8IZJ6 230 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 OR10J5Q8NHC4 309 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 KCNE4Q8WWG9 221 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 C20orf24Q9BUV8 137 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 GHITMQ9H3K2 345 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 KCNK15Q9H427 330 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 DTX4Q9Y2E6 619 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 STRAPQ9Y3F4 350 aaKnown RBP14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 LINC00862A6NCI5 91 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 IFITM2Q01629 132 aa14.42□□□□□ -0.1
PTPRN2-201ENST00000389413 TMEM88Q6PEY1 159 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms