RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 A0A0D9SG52 128 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 C9J4A7 227 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 ZIC3O60481 467 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 STK17BO94768 372 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 CCL3P10147 92 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 PRF1P14222 555 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 POU3F2P20265 443 aaPredicted RBP13.18□□□□□ -0.3
SCFD2-201ENST00000388940 HRH1P35367 487 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 SGCAQ16586 387 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 OR52W1Q6IF63 320 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 Q6ZSR3 168 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 RNF144BQ7Z419 303 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 NAA40Q86UY6 237 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 ARMC10Q8N2F6 343 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 GJC3Q8NFK1 279 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 OR2Y1Q8NGV0 311 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 INTS12Q96CB8 462 aaKnown RBP13.18□□□□□ -0.3
SCFD2-201ENST00000388940 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
SCFD2-201ENST00000388940 NICN1Q9BSH3 213 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
SCFD2-201ENST00000388940 KIAA1549Q9HCM3 1950 aa13.18□□□□□ -0.3
SCFD2-201ENST00000388940 A0A0U1RQV5 110 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 C9orf170A2RU37 121 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 OR5H14A6NHG9 310 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 CFIP05156 583 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ICAM2P13598 275 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 OR3A4PP47883 348 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 SUCLG1P53597 346 aaKnown RBP13.17□□□□□ -0.3
SCFD2-201ENST00000388940 SLC22A6Q4U2R8 563 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF660Q6AZW8 331 aaPredicted RBP13.17□□□□□ -0.3
SCFD2-201ENST00000388940 C17orf107Q6ZR85 190 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 TMEM104Q8NE00 496 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 CST11Q9H112 138 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 GHRLQ9UBU3 117 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 MFSD2BA6NFX1 497 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 MPIG6BO95866 241 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 IFNA6P05013 189 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 HCKP08631 526 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 HIST1H1DP16402 221 aaKnown RBP13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ANOS1P23352 680 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 CSNK2A1P68400 391 aaPredicted RBP13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ECH1Q13011 328 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 PPP1R1AQ13522 171 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ENDOGQ14249 297 aaKnown RBP13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ACTBL2Q562R1 376 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 PLAC9Q5JTB6 97 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF546Q86UE3 836 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 CCDC54Q8NEL0 328 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 OR56B1Q8NGI3 324 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 RAB3CQ96E17 227 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 SPACA5Q96QH8 159 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 TMEM59Q9BXS4 323 aa13.17□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF230Q9UIE0 474 aaPredicted RBP13.17□□□□□ -0.3
SCFD2-201ENST00000388940 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 EFSO43281 561 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 CCL4P13236 92 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 MGMTP16455 207 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 THBS4P35443 961 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 MLF1P58340 268 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF345Q14585 488 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 VAX1Q5SQQ9 334 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 PHYHD1Q5SRE7 291 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 ALKAL2Q6UX46 152 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 RPS19BP1Q86WX3 136 aaKnown RBP13.16□□□□□ -0.3
SCFD2-201ENST00000388940 HOGA1Q86XE5 327 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 TMEM123Q8N131 208 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 FAM89BQ8N5H3 189 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 OR5M9Q8NGP3 310 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 OR4K15Q8NH41 348 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 NABP1Q96AH0 204 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 CCDC120Q96HB5 630 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 PGAM5Q96HS1 289 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 GNRHR2Q96P88 292 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 PHB2Q99623 299 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 OCSTAMPQ9BR26 566 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 URM1Q9BTM9 101 aaKnown RBP13.16□□□□□ -0.3
SCFD2-201ENST00000388940 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■■■□ 26.7
SCFD2-201ENST00000388940 V9GYS6 101 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 OR2AT4A6NND4 320 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 CEACAM18A8MTB9 384 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 SOCS1O15524 211 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 DHHO43323 396 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 CBR3O75828 277 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 CD63P08962 238 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
SCFD2-201ENST00000388940 TMEM50BP56557 158 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 TAS2R31P59538 309 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 RAC1P63000 192 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 IL13RA1P78552 427 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 BAMBIQ13145 260 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 RAET1LQ5VY80 246 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 C11orf87Q6NUJ2 197 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 OR9K2Q8NGE7 335 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
SCFD2-201ENST00000388940 FBXW5Q969U6 566 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 TMEM41AQ96HV5 264 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 LYZL4Q96KX0 146 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms