RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 NINJ2Q9NZG7 142 aa-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 STX18Q9P2W9 335 aaKnown RBP-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 RNF14Q9UBS8 474 aa-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 CHRNA9Q9UGM1 479 aa-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 IKZF2Q9UKS7 526 aa-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 ANGPT4Q9Y264 503 aa-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 PIGLQ9Y2B2 252 aa-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 HSPE1-MOB4S4R3N1 261 aa-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 INTS1Q8N201 2190 aaKnown RBP-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 ZFC3H1O60293 1989 aaKnown RBP-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 PCDH11XQ9BZA7 1347 aa-0.14□□□□□ -2.43
SNORD28-201ENST00000384706 SHANK3Q9BYB0 1731 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 RNF103-CHMP3A0A140T963 221 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 A0A1W2PRQ8 180 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ZNF729A6NN14 1252 aaPredicted RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 F5H5T6 163 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 H7C1H1 209 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ARPC3O15145 178 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 NMT2O60551 498 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 KLHL41O60662 606 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SMPD2O60906 423 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 PSIP1O75475 530 aaKnown RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 FGFR1OPO95684 399 aaKnown RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SERPINA5P05154 406 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 KRT8P05787 483 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 UGT2B4P06133 528 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SEC11BP0C7V7 166 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 IL9P15248 144 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 KITLGP21583 273 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 CRABP2P29373 138 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 IFNA8P32881 189 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 CD70P32970 193 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 BMI1P35226 326 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 TUFMP49411 452 aaKnown RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 INPP1P49441 399 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 NUDT2P50583 147 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SSR4P51571 173 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 NDUFA8P51970 172 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 CBX1P83916 185 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ATP5G2Q06055 141 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SCGB2A2Q13296 93 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 NAB1Q13506 487 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ART3Q13508 389 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ZNF726P1Q15940 193 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 IMMTQ16891 758 aaKnown RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 EXOC3L2Q2M3D2 409 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 PYCR3Q53H96 274 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 MRPL2Q5T653 305 aaKnown RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 C1orf185Q5T7R7 199 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 TTC23Q5W5X9 447 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 LGALS9CQ6DKI2 356 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 NOXRED1Q6NXP6 359 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 METAP1DQ6UB28 335 aaPredicted RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 NPSR1Q6W5P4 371 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 CYHR1Q6ZMK1 362 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 MBOAT1Q6ZNC8 495 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 RTL4Q6ZR62 310 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SLC25A48Q6ZT89 311 aaKnown RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 OTUD6AQ7L8S5 288 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 TMEM150AQ86TG1 271 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 FAM71AQ8IYT1 594 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 HS3ST5Q8IZT8 346 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ZCCHC24Q8N2G6 241 aaKnown RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SLC25A45Q8N413 288 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 FAM184AQ8NB25 1140 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 UBAC2Q8NBM4 344 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 OR4F6Q8NGB9 312 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 OR52E2Q8NGJ4 325 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 OR4C16Q8NGL9 310 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 OR5B3Q8NH48 314 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ENKURQ8TC29 256 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 APH1BQ8WW43 257 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 CDS1Q92903 461 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 APOBEC3DQ96AK3 386 aaPredicted RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 KCNS1Q96KK3 526 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 RPRD1AQ96P16 312 aaPredicted RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 MTMR9Q96QG7 549 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 KCNK16Q96T55 309 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 GPA33Q99795 319 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 B9D2Q9BPU9 175 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SPXQ9BT56 116 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 TRIM62Q9BVG3 475 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 PARD6BQ9BYG5 372 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 TBL1XR1Q9BZK7 514 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 SLC19A3Q9BZV2 496 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 AICDAQ9GZX7 198 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 PORCNQ9H237 461 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 RWDD1Q9H446 243 aaPredicted RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 PIGUQ9H490 435 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ANKRD19PQ9H560 264 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 VPS37BQ9H9H4 285 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 FAM60AQ9NP50 221 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 RRAGDQ9NQL2 400 aaPredicted RBP-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 CA10Q9NS85 328 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 DOK5Q9P104 306 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 NAGKQ9UJ70 344 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 MOSPD1Q9UJG1 213 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 C22orf24Q9Y442 160 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 HES2Q9Y543 173 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 COMMD3-BMI1R4GMX3 469 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms