RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 CALM1P0DP23 149 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 CALM2P0DP24 149 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 CALM3P0DP25 149 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 BMI1P35226 326 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 ILKQ13418 452 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 OR5I1Q13606 314 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 TRIM40Q6P9F5 258 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 TMEM270Q6UE05 265 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 LHFPL4Q7Z7J7 247 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 ANKRD23Q86SG2 305 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 COMTD1Q86VU5 262 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 RPP25LQ8N5L8 163 aaKnown RBP-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 OR1J4Q8NGS1 313 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 OR2V1Q8NHB1 315 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 ZNF420Q8TAQ5 688 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 FCGR1BQ92637 280 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 SPATA13Q96N96 652 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 OR52B2Q96RD2 323 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 NUDT9Q9BW91 350 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 NEUROG2Q9H2A3 272 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 NKIRAS2Q9NYR9 191 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 AURKCQ9UQB9 309 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 COMMD3-BMI1R4GMX3 469 aa-1.34□□□□□ -2.62
RNU6-880P-201ENST00000384526 SBF1O95248 1867 aa-1.35□□□□□ -2.62
RNU6-880P-201ENST00000384526 PLXNA1Q9UIW2 1896 aa-1.35□□□□□ -2.62
RNU6-880P-201ENST00000384526 VIRMAQ69YN4 1812 aaKnown RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 NKTRP30414 1462 aaKnown RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 PHRF1Q9P1Y6 1649 aaKnown RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 A0A1W2PNV4 684 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 MEIS3P1A6NDR6 274 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 L7N2F9 121 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 RGS16O15492 202 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 CHMP2AO43633 222 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 CREB3O43889 395 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 LRATO95237 230 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 CLPSP04118 112 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 FREM3P0C091 2139 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 RPA2P15927 270 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 ZNF22P17026 224 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 AHCYP23526 432 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 CEACAM3P40198 252 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 SYNJ2BPP57105 145 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 LIPEQ05469 1076 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 DHRS2Q13268 280 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 RCAN2Q14206 197 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 GANABQ14697 944 aaKnown RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 DEFB112Q30KQ8 113 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 LGALS9BQ3B8N2 356 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 RAB12Q6IQ22 244 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 SLC25A25Q6KCM7 469 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 ENPP6Q6UWR7 440 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 GALNTL5Q7Z4T8 443 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 CBWD2Q8IUF1 395 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 FAM71AQ8IYT1 594 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 CCDC89Q8N998 374 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 MINDY2Q8NBR6 621 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 PYROXD1Q8WU10 500 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 PDCD6IPQ8WUM4 868 aaKnown RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 TFGQ92734 400 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 PINX1Q96BK5 328 aaKnown RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 B9D2Q9BPU9 175 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 KCTD14Q9BQ13 255 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 IL36GQ9NZH8 169 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 SH3BGRL2Q9UJC5 107 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 TMCO1Q9UM00 188 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 PLXNA4Q9HCM2 1894 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 SLIT2O94813 1529 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 RREB1Q92766 1687 aa-1.35□□□□□ -2.63
RNU6-880P-201ENST00000384526 BAZ1BQ9UIG0 1483 aaKnown RBP-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 ATG2AQ2TAZ0 1938 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 IGKV1-27A0A075B6S5 117 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 OR5B21A6NL26 309 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 ODF3BA8MYP8 253 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 HSF2BPO75031 334 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 FARS2O95363 451 aaKnown RBP-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 ETS2P15036 469 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 SLC2A5P22732 501 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 KRT20P35900 424 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 UGT2B15P54855 530 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 SLC26A5P58743 744 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 KIAA1024LP59773 190 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 PLP1P60201 277 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 KCNJ2P63252 427 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 RBP5P82980 135 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 ZNF791Q3KP31 576 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 C9orf135Q5VTT2 229 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 TMED8Q6PL24 325 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 NKAIN4Q8IVV8 208 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 BBS7Q8IWZ6 715 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 KDM8Q8N371 416 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 TCAIMQ8N3R3 496 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 ZDHHC22Q8N966 263 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 OR4D6Q8NGJ1 314 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 RBPMSQ93062 196 aaKnown RBP-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 TMEM231Q9H6L2 316 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 METTL17Q9H7H0 456 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 GNG12Q9UBI6 72 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 B9D1Q9UPM9 204 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 GSTK1Q9Y2Q3 226 aa-1.36□□□□□ -2.63
RNU6-880P-201ENST00000384526 HSPE1-MOB4S4R3N1 261 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms