RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 ZFP82Q8N141 532 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ZADH2Q8N4Q0 377 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 BBOF1Q8ND07 529 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 VN1R2Q8NFZ6 395 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 OR1L1Q8NH94 360 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GEMIN6Q8WXD5 167 aaKnown RBP-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ZNF566Q969W8 418 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 RERGQ96A58 199 aaPredicted RBP-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ZUFSPQ96AP4 578 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 FAM3DQ96BQ1 224 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GLT1D1Q96MS3 346 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TGS1Q96RS0 853 aaKnown RBP-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 MIXL1Q9H2W2 232 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PPDPFQ9H3Y8 114 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TMEM14CQ9P0S9 112 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 STX18Q9P2W9 335 aaKnown RBP-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 CLN8Q9UBY8 286 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 NCKAP1Q9Y2A7 1128 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 RNF11Q9Y3C5 154 aa-3.29□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TRAV18A0A075B6X5 111 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TRAV19A0A0A6YYK7 116 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 A0A1W2PR77 199 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 LOC105371045A0A1W2PR82 267 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 A0A1W2PRG0 241 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 RNF222A6NCQ9 220 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 IBA57-AS1B1ANH7 110 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GPR89AB7ZAQ6 455 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 H7C2G1 150 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GABRPO00591 440 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 EI24O14681 340 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PMM2O15305 246 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 CHMP2AO43633 222 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PLIN1O60240 522 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PDE8AO60658 829 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 SLC25A12O75746 678 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GLCEO94923 617 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 FCER2P06734 321 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 CSN3P07498 182 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GPR89BP0CG08 455 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ABOP16442 354 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PGCP20142 388 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PRKACBP22694 351 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PRDX2P32119 198 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 FRKP42685 505 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PKNOX1P55347 436 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 IFITM3Q01628 133 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TFAP4Q01664 338 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 MC1RQ01726 317 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 AQP6Q13520 282 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ITIH4Q14624 930 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PDK2Q15119 407 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 RBBP7Q16576 425 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 C21orf62-AS1Q17RA5 79 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TMEM241Q24JQ0 296 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TWISTNBQ3B726 338 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ATP6AP1LQ52LC2 224 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 MPPE1Q53F39 396 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TIGD3Q6B0B8 471 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 NAA16Q6N069 864 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 STEAP1BQ6NZ63 245 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 LDHAL6AQ6ZMR3 332 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ZNF833PQ6ZTB9 187 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ZNF571Q7Z3V5 609 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GPR141Q7Z602 305 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TSEN54Q7Z6J9 526 aaKnown RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 KTN1-AS1Q86SY8 53 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 MARCH3Q86UD3 253 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TPH2Q8IWU9 490 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 NIM1KQ8IY84 436 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 OR52J3Q8NH60 311 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TWIST2Q8WVJ9 160 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GOLGA1Q92805 767 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 P2RX5Q93086 422 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 C3orf49Q96BT1 292 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PRPF18Q99633 342 aaKnown RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 NAT9Q9BTE0 207 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TBC1D10AQ9BXI6 508 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PUS7LQ9H0K6 701 aaKnown RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 CHMP1AQ9HD42 196 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 IL26Q9NPH9 171 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TBC1D22BQ9NU19 505 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 PAQR5Q9NXK6 330 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TRAF3IP3Q9Y228 551 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 ATP10DQ9P241 1426 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 KIDINS220Q9ULH0 1771 aa-3.3□□□□□ -2.94
RNU6-1340P-201ENST00000384438 A0A087WUU8 490 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TRBV6-8A0A0A6YYG3 113 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 FAM170AA1A519 330 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 OR5B21A6NL26 309 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GABRDO14764 452 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 MAS1P04201 325 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 SHBGP04278 402 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GAPDHP04406 335 aaKnown RBP-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 CTSEP14091 401 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 CTNNA1P35221 906 aaKnown RBP-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 GPX6P59796 221 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 TNFAIP6P98066 277 aaPredicted RBP-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 BST1Q10588 318 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 CDH17Q12864 832 aa-3.31□□□□□ -2.94
RNU6-1340P-201ENST00000384438 EIF2B1Q14232 305 aaKnown RBP-3.31□□□□□ -2.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms