RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ZNF732B4DXR9 585 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 RAG2P55895 527 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 ISL1P61371 349 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 FUBP1Q96AE4 644 aaKnown RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 BARX1Q9HBU1 254 aaPredicted RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 NCBP2LA6PVI3 153 aaKnown RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 PHF1O43189 567 aaPredicted RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 AVPR2P30518 371 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 SNRPNP63162 240 aaKnown RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 LYG2Q86SG7 212 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 CDRT4Q8N9R6 151 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 OR2T10Q8NGZ9 312 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 OR4C12Q96R67 309 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 PRR14Q9BWN1 585 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 NMES1Q9C002 83 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 IL21Q9HBE4 155 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 NPTNQ9Y639 398 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 MT-ATP6P00846 226 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 GLI4P10075 376 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 CD1CP29017 333 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 GPR18Q14330 331 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 SYPL1Q16563 259 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 ETFBKMTQ8IXQ9 262 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 EMG1Q92979 244 aaKnown RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 TRIB3Q96RU7 358 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 CDCA3Q99618 268 aaPredicted RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 ONECUT1Q9UBC0 465 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 MRPS2Q9Y399 296 aaKnown RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 ANKRD12Q6UB98 2062 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 LOC100289279A0A1B0GTE1 492 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 A0A1W2PPE2 198 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 TNFRSF10CO14798 259 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 TSPAN13O95857 204 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 NKX2-1P43699 371 aaPredicted RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 FAM74A3Q4VXF1 159 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 PHLDA2Q53GA4 152 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 OR8G2PQ6IF36 304 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 WDTC1Q8N5D0 677 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 TMEM178AQ8NBL3 297 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 ASB17Q8WXJ9 295 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 HAPLN2Q9GZV7 340 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 P2RY12Q9H244 342 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 CHODLQ9H9P2 273 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 TMED3Q9Y3Q3 217 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 SEMG1P04279 462 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 ERVFC1-1P60608 527 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 RAB32Q13637 225 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 RPEL1Q2QD12 228 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 CST9Q5W186 159 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 NPSR1Q6W5P4 371 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 OR2Y1Q8NGV0 311 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 C1QTNF2Q9BXJ5 285 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 SLIRPQ9GZT3 109 aaKnown RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 GDE1Q9NZC3 331 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 A0A1W2PR80 420 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 OR8G3PP0DMU2 310 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 PRLHRP49683 370 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 TIMD4Q96H15 378 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 EMC6Q9BV81 110 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 TCHHQ07283 1943 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 COL1A1P02452 1464 aaPredicted RBP9.79□□□□□ -0.84
CLCN4-202ENST00000380833 CTSLP07711 333 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 ST3GAL2Q16842 350 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 CTU2Q2VPK5 515 aaKnown RBP9.79□□□□□ -0.84
CLCN4-202ENST00000380833 WDR5BQ86VZ2 330 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 PATE1Q8WXA2 126 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 PBX4Q9BYU1 374 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 FGF21Q9NSA1 209 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 ABCC6O95255 1503 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 TK1P04183 234 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 HTR1DP28221 377 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 VWA2Q5GFL6 755 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 SFRP2Q96HF1 295 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 MBOAT4Q96T53 435 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 COL25A1Q9BXS0 654 aaPredicted RBP9.79□□□□□ -0.84
CLCN4-202ENST00000380833 R4GN57 208 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 MCRIP1C9JLW8 97 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 CRXO43186 299 aaPredicted RBP9.79□□□□□ -0.84
CLCN4-202ENST00000380833 HTN1P15515 57 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 RGRP47804 291 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 CYB561P49447 251 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 NPY4RP50391 375 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 WNT7BP56706 349 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 ELAVL1Q15717 326 aaKnown RBP9.79□□□□□ -0.84
CLCN4-202ENST00000380833 CLEC18BQ6UXF7 455 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 GFRALQ6UXV0 394 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 CAMKMTQ7Z624 323 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 GHSRQ92847 366 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 C3orf30Q96M34 536 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 FUT9Q9Y231 359 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 LRRC30A6NM36 301 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 DRGXA6NNA5 263 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 POLR2IP36954 125 aaKnown RBP9.79□□□□□ -0.84
CLCN4-202ENST00000380833 TBC1D28Q2M2D7 210 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 MRPL2Q5T653 305 aaKnown RBP9.79□□□□□ -0.84
CLCN4-202ENST00000380833 C6orf15Q6UXA7 325 aaPredicted RBP9.79□□□□□ -0.84
CLCN4-202ENST00000380833 PELI2Q9HAT8 420 aa9.79□□□□□ -0.84
CLCN4-202ENST00000380833 OR2M5A3KFT3 312 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms