RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CLEC4MQ9H2X3 399 aaPredicted RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 HEXA-AS1Q9H8Q6 139 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 UBQLN2Q9UHD9 624 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 KLF2Q9Y5W3 355 aaPredicted RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 A0A0U1RQV5 110 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 RAB27BO00194 218 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 SMAD9O15198 467 aaKnown RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 TRAPPC6AO75865 159 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CHRM2P08172 466 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 GIPP09681 153 aaPredicted RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 ABOP16442 354 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CNR1P21554 472 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 ZP3P21754 424 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 RAP2BP61225 183 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 HIST1H3AP68431 136 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 MRPS34P82930 218 aaKnown RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 QRFPP83859 136 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 RIPPLY1Q0D2K3 151 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 EXOSC2Q13868 293 aaKnown RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 MEF2DQ14814 521 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 ZNF260Q3ZCT1 412 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 PHYHD1Q5SRE7 291 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 HIST2H3PS2Q5TEC6 136 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 HIST2H3AQ71DI3 136 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 PAQR4Q8N4S7 273 aaPredicted RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 LINC00052Q96N35 136 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 C12orf57Q99622 126 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 EXO5Q9H790 373 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CCDC187A0A096LP49 1063 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 C9orf172C9J069 976 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 UBBP0CG47 229 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CD59P13987 128 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CASRP41180 1078 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 AKR1D1P51857 326 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 MOGAT2Q3SYC2 334 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 PDSS1Q5T2R2 415 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 FAM27BQ5VT28 67 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CHMP1BQ7LBR1 199 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 SLC36A1Q7Z2H8 476 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 ZNF101Q8IZC7 436 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 LRRC18Q8N456 261 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CHST4Q8NCG5 386 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 KCNG3Q8TAE7 436 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 DVL3Q92997 716 aaPredicted RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 SPTSSAQ969W0 71 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 THOC3Q96J01 351 aaKnown RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 ZNF319Q9P2F9 582 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 BOKQ9UMX3 212 aaPredicted RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 TMEM235A6NFC5 223 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 TMEM14DPA8MWL7 114 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 F5H5K5 113 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CD74P04233 296 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 HCKP08631 526 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 C4BPBP20851 252 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 NUP62P37198 522 aaPredicted RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 SLC6A9P48067 706 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 UNC119Q13432 240 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 CDCP2Q5VXM1 449 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 TFAP2EQ6VUC0 442 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 PNLDC1Q8NA58 520 aaKnown RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 OR14K1Q8NGZ2 314 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 C10orf35Q96D05 121 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 ZMAT3Q9HA38 289 aaKnown RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 PLEK2Q9NYT0 353 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 ABI3Q9P2A4 366 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 GLS2Q9UI32 602 aa11.11□□□□□ -0.63
VPS16-202ENST00000380445 MRPS28Q9Y2Q9 187 aaKnown RBP11.11□□□□□ -0.63
VPS16-202ENST00000380445 A0A0G2JMM0 328 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 A0A1W2PPB8 328 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 A0A1W2PRS3 328 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 LRRC3CA6NJW4 275 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 KIR3DP1A8MWS1 328 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 DISC1C4P0D8 188 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 AMY2AP04746 511 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 ITGB2P05107 769 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 BTF3P20290 206 aaKnown RBP11.1□□□□□ -0.63
VPS16-202ENST00000380445 GDF1P27539 372 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 OTX1P32242 354 aaPredicted RBP11.1□□□□□ -0.63
VPS16-202ENST00000380445 RPL35P42766 123 aaKnown RBP11.1□□□□□ -0.63
VPS16-202ENST00000380445 ECH1Q13011 328 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 GFOD2Q3B7J2 385 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 LGALSLQ3ZCW2 172 aaPredicted RBP11.1□□□□□ -0.63
VPS16-202ENST00000380445 CDNFQ49AH0 187 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 GGNQ86UU5 652 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 OR5AS1Q8N127 324 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 OR2V1Q8NHB1 315 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 LRFN1Q9P244 771 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 FLVCR1Q9Y5Y0 555 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 OR2A4O95047 310 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 IGLV3-1P01715 115 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 S100A6P06703 90 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 POU3F2P20265 443 aaPredicted RBP11.1□□□□□ -0.63
VPS16-202ENST00000380445 THBS4P35443 961 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 DLSTP36957 453 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 ZNF81P51508 661 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 GLIPR1L1Q6UWM5 242 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 OR10R2Q8NGX6 335 aa11.1□□□□□ -0.63
VPS16-202ENST00000380445 PP6455Q8WZ26 134 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms