RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CBR1P16152 277 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 GNB3P16520 340 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 TBXA2RP21731 343 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 GZMMP51124 257 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 OR1D5P58170 312 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 FZD2Q14332 565 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 TESK1Q15569 626 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 MLF2Q15773 248 aaPredicted RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 FAM74A1Q5RGS3 127 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 NKAIN2Q5VXU1 208 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 ZNF626Q68DY1 528 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 TMEM182Q6ZP80 229 aaPredicted RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 OR2W3Q7Z3T1 314 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 RTN4IP1Q8WWV3 396 aaPredicted RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 ZG16BQ96DA0 208 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 MRGPRX1Q96LB2 322 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 RPP25Q9BUL9 199 aaKnown RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 NUDT9Q9BW91 350 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 CHST6Q9GZX3 395 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 HEYLQ9NQ87 328 aaPredicted RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 C20orf141Q9NUB4 165 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 UFSP2Q9NUQ7 469 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 OR5V1Q9UGF6 321 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 C20orf202A1L168 122 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 SPINT2O43291 252 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 XRCC2O43543 280 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 LRP3O75074 770 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 PPP2CBP62714 309 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 PPP2CAP67775 309 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 DHODHQ02127 395 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 CLPPQ16740 277 aaPredicted RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 TSLPQ969D9 159 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 FN3KRPQ9HA64 309 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 MRPS18AQ9NVS2 196 aaKnown RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 MED29Q9NX70 200 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 BDP1A6H8Y1 2624 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 SPAG17Q6Q759 2223 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 KIF26AQ9ULI4 1882 aaPredicted RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 A0A1W2PPC1 479 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 ANKRD20A5PA0PJZ0 165 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 FIGNL2A6NMB9 653 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 OGG1O15527 345 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 TUSC2O75896 110 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 NRASP01111 189 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 GUSBP08236 651 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 INHBBP09529 407 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 TCN2P20062 427 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 VWA2Q5GFL6 755 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 SKA3Q8IX90 412 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 GCNT2Q8N0V5 402 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 CNEP1R1Q8N9A8 125 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 OR2AE1Q8NHA4 323 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 FBXW5Q969U6 566 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 ARSGQ96EG1 525 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 MRGPRX3Q96LB0 322 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 SPACA5Q96QH8 159 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 C12orf57Q99622 126 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 C20orf24Q9BUV8 137 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 NXF2Q9GZY0 626 aaKnown RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 RHOFQ9HBH0 211 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 GDF2Q9UK05 429 aaPredicted RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 ING1Q9UK53 422 aaPredicted RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 HSPB6O14558 160 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 DEGS1O15121 323 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 CST4P01036 141 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 PI3P19957 117 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 ACKR3P25106 362 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 CYB561P49447 251 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 MVDP53602 400 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 H3F3AP84243 136 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 GUCA2AQ02747 115 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 EIF4EBP2Q13542 120 aaPredicted RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 LAIR1Q6GTX8 287 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 LINC01555Q8NAE3 123 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 OR5M8Q8NGP6 311 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 MUCL1Q96DR8 90 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 TINAGL1Q9GZM7 467 aaPredicted RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 PARP12Q9H0J9 701 aaKnown RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 MIXL1Q9H2W2 232 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 RAB18Q9NP72 206 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 PISDQ9UG56 409 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 GAB2Q9UQC2 676 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 POLDIP2Q9Y2S7 368 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 URGCP-MRPS24S4R325 110 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 FFAR1O14842 300 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 PLA2G10O15496 165 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 DHHO43323 396 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 S100A7P31151 101 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 THBS4P35443 961 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 PJVKQ0ZLH3 352 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 DHRS2Q13268 280 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 ENDOGQ14249 297 aaKnown RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 TMEM196Q5HYL7 178 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 WDR38Q5JTN6 314 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 TMEM268Q5VZI3 342 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 B3GNTL1Q67FW5 361 aaPredicted RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 NAA40Q86UY6 237 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 C17orf47Q8NEP4 570 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 OR5AP2Q8NGF4 316 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 OR4C3Q8NH37 302 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms