RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 NOP16Q9Y3C1 178 aaKnown RBP21.12■□□□□ 0.97
SNX5-201ENST00000377759 RAD51DO75771 328 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 VAMP5O95183 116 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 NR2C1P13056 603 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 MPGP29372 298 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 HIST1H3AP68431 136 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 HIST2H3PS2Q5TEC6 136 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 RGS7BPQ6MZT1 257 aaPredicted RBP21.12■□□□□ 0.97
SNX5-201ENST00000377759 HIST2H3AQ71DI3 136 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 SCARB1Q8WTV0 552 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 PGAM5Q96HS1 289 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 FOXD3Q9UJU5 478 aaPredicted RBP21.12■□□□□ 0.97
SNX5-201ENST00000377759 DKKL1Q9UK85 242 aa21.12■□□□□ 0.97
SNX5-201ENST00000377759 CNTRLQ7Z7A1 2325 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 NSG1A0A0A6YYJ2 146 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 C9orf170A2RU37 121 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 CCSO14618 274 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 PMP2P02689 132 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 HIST1H1DP16402 221 aaKnown RBP21.11■□□□□ 0.97
SNX5-201ENST00000377759 DUSP3P51452 185 aaPredicted RBP21.11■□□□□ 0.97
SNX5-201ENST00000377759 ZNF660Q6AZW8 331 aaPredicted RBP21.11■□□□□ 0.97
SNX5-201ENST00000377759 ADAD2Q8NCV1 583 aaKnown RBP21.11■□□□□ 0.97
SNX5-201ENST00000377759 GJC3Q8NFK1 279 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 OR6K3Q8NGY3 331 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 RAB3CQ96E17 227 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 TMEM41AQ96HV5 264 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 TMEM59Q9BXS4 323 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 NARFLQ9H6Q4 476 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 HPF1Q9NWY4 346 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 RDH8Q9NYR8 311 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 COLQQ9Y215 455 aaPredicted RBP21.11■□□□□ 0.97
SNX5-201ENST00000377759 OR5H14A6NHG9 310 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 NPIPA2E9PIF3 369 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 NPIPA3F8WFD2 350 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 DHHO43323 396 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 GSTP1P09211 210 aaKnown RBP21.11■□□□□ 0.97
SNX5-201ENST00000377759 PRF1P14222 555 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 HLA-GP17693 338 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 NAT1P18440 290 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 TBPP20226 339 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 ARMC10Q8N2F6 343 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 LRRC18Q8N456 261 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 MITD1Q8WV92 249 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 ST8SIA4Q92187 359 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 ZNF837Q96EG3 531 aaPredicted RBP21.11■□□□□ 0.97
SNX5-201ENST00000377759 CXorf58Q96LI9 332 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 DMRTA2Q96SC8 542 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 SRXN1Q9BYN0 137 aa21.11■□□□□ 0.97
SNX5-201ENST00000377759 F5H5K5 113 aa21.1■□□□□ 0.97
SNX5-201ENST00000377759 LIN54Q6MZP7 749 aa21.1■□□□□ 0.97
SNX5-201ENST00000377759 LPCAT3Q6P1A2 487 aa21.1■□□□□ 0.97
SNX5-201ENST00000377759 C1QL2Q7Z5L3 287 aa21.1■□□□□ 0.97
SNX5-201ENST00000377759 RBPMSQ93062 196 aaKnown RBP21.1■□□□□ 0.97
SNX5-201ENST00000377759 hCG_1807616A0A1W2PRN6 198 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 TNFSF11O14788 317 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 EFSO43281 561 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 OTX1P32242 354 aaPredicted RBP21.09■□□□□ 0.97
SNX5-201ENST00000377759 GUCA1AP43080 201 aaPredicted RBP21.09■□□□□ 0.97
SNX5-201ENST00000377759 SUCLG1P53597 346 aaKnown RBP21.09■□□□□ 0.97
SNX5-201ENST00000377759 RAC1P63000 192 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 GK2Q14410 553 aaPredicted RBP21.09■□□□□ 0.97
SNX5-201ENST00000377759 MICBQ29980 383 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 TRIM61Q5EBN2 209 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 SIGIRRQ6IA17 410 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 TMEM65Q6PI78 240 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 OR4K15Q8NH41 348 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 COQ8AQ8NI60 647 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 NAA11Q9BSU3 229 aaPredicted RBP21.09■□□□□ 0.97
SNX5-201ENST00000377759 C1QTNF6Q9BXI9 259 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 SLC39A1Q9NY26 324 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 ZNF224Q9NZL3 707 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 CBR3O75828 277 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 FOLR3P41439 243 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 B3GALT5-AS1P59052 145 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 CSNK2A1P68400 391 aaPredicted RBP21.09■□□□□ 0.97
SNX5-201ENST00000377759 ECH1Q13011 328 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 ZNF546Q86UE3 836 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 HOGA1Q86XE5 327 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 ARHGAP5-AS1Q96IT6 56 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 SEC22AQ96IW7 307 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 GUCD1Q96NT3 240 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 GPER1Q99527 375 aa21.09■□□□□ 0.97
SNX5-201ENST00000377759 RBM24Q9BX46 236 aaKnown RBP21.09■□□□□ 0.97
SNX5-201ENST00000377759 A0A0G2JMM0 328 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 A0A0U1RQV5 110 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 A0A1W2PPB8 328 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 A0A1W2PRS3 328 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 POM121CA8CG34 1229 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 KIR3DP1A8MWS1 328 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 MFNGO00587 321 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 CRTAPO75718 401 aaPredicted RBP21.08■□□□□ 0.97
SNX5-201ENST00000377759 CER1O95813 267 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 KISS1Q15726 138 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 FAHD2BQ6P2I3 314 aaPredicted RBP21.08■□□□□ 0.97
SNX5-201ENST00000377759 LRRC20Q8TCA0 184 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 FAHD2AQ96GK7 314 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 V9GYS6 101 aa21.08■□□□□ 0.97
SNX5-201ENST00000377759 MFSD2BA6NFX1 497 aa21.08■□□□□ 0.96
SNX5-201ENST00000377759 LAMTOR5O43504 91 aa21.08■□□□□ 0.96
SNX5-201ENST00000377759 IL13RA1P78552 427 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms