RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ATG2AQ2TAZ0 1938 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 TEX13DA0A0J9YY54 714 aaPredicted RBP11.44□□□□□ -0.58
USP11-204ENST00000377107 SULT1C2O00338 296 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 PLPPR5Q32ZL2 321 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 ZNF585AQ6P3V2 769 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 C1QL2Q7Z5L3 287 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 BVESQ8NE79 360 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 URM1Q9BTM9 101 aaKnown RBP11.44□□□□□ -0.58
USP11-204ENST00000377107 A0A0D9SG52 128 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 ZNF705EA8MWA4 302 aaPredicted RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 FBXO24O75426 580 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 B3GALNT1O75752 331 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 ZP3P21754 424 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 OPRM1P35372 400 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 ZNF441Q8N8Z8 693 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 BHLHE23Q8NDY6 225 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 HRH4Q9H3N8 390 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 GPR173Q9NS66 373 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 B3GAT1Q9P2W7 334 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 FREM2Q5SZK8 3169 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 COL6A3P12111 3177 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 KRBOX1C9JBD0 128 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 SLC33A1O00400 549 aaPredicted RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 RPA2P15927 270 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 MGMTP16455 207 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 C5orf46Q6UWT4 87 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 CLEC9AQ6UXN8 241 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 YRDCQ86U90 279 aaKnown RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 C17orf82Q86X59 251 aaPredicted RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 OR1S2Q8NGQ3 325 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 ZNF385AQ96PM9 386 aaKnown RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 HDHD3Q9BSH5 251 aaPredicted RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 PIGLQ9Y2B2 252 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 TMEM127O75204 238 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 F12P00748 615 aaPredicted RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 KLK3P07288 261 aaPredicted RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 UBBP0CG47 229 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 RPS27AP62979 156 aaKnown RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 UBA52P62987 128 aaKnown RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 TAGLNQ01995 201 aaKnown RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 KCNG3Q8TAE7 436 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 POC1BQ8TC44 478 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 UTP23Q9BRU9 249 aaKnown RBP11.43□□□□□ -0.58
USP11-204ENST00000377107 REG4Q9BYZ8 158 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 HPF1Q9NWY4 346 aa11.43□□□□□ -0.58
USP11-204ENST00000377107 TP53I11O14683 189 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 AQP8O94778 261 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 FARS2O95363 451 aaKnown RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 CSTBP04080 98 aaKnown RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 HOXD4P09016 255 aaPredicted RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 FSTP19883 344 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 SNTB1Q13884 538 aaKnown RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 ZNF169Q14929 603 aaPredicted RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 C6orf201Q7Z4U5 140 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 BPIFCQ8NFQ6 507 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 OR6K3Q8NGY3 331 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 SPACA9Q96E40 222 aaPredicted RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 MRGPRX4Q96LA9 322 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 CDC6Q99741 560 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 GAREM1Q9H706 876 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 PLEKHJ1Q9NW61 149 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 C19orf25Q9UFG5 118 aaPredicted RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 NCOA6Q14686 2063 aaPredicted RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 SPRY1O43609 319 aaPredicted RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 SERPINA5P05154 406 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 CCL4P13236 92 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 PSMB6P28072 239 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 MPGP29372 298 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 OTX2P32243 289 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 CASRP41180 1078 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 TAF9Q16594 264 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 PLAC9Q5JTB6 97 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 C1orf100Q5SVJ3 147 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 LYSMD4Q5XG99 296 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 ACOT7LQ6ZUV0 252 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 AQP3Q92482 292 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 FBXW5Q969U6 566 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 LPAR5Q9H1C0 372 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 OR10A2Q9H208 303 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 ZNF768Q9H5H4 540 aaKnown RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 PCDHB10Q9UN67 800 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 IGHV5-10-1A0A0J9YXX1 117 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 PATE3B3GLJ2 98 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 CDC14BO60729 498 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 RAD51DO75771 328 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 BPNT1O95861 308 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 LCATP04180 440 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 ZBTB25P24278 435 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 RFC3P40938 356 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 SLC25A42Q86VD7 318 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 TERB2Q8NHR7 220 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 ULBP2Q9BZM5 246 aa11.42□□□□□ -0.58
USP11-204ENST00000377107 LSM5Q9Y4Y9 91 aaKnown RBP11.42□□□□□ -0.58
USP11-204ENST00000377107 TOR1AO14656 332 aa11.41□□□□□ -0.58
USP11-204ENST00000377107 TNFSF11O14788 317 aa11.41□□□□□ -0.58
USP11-204ENST00000377107 EFSO43281 561 aa11.41□□□□□ -0.58
USP11-204ENST00000377107 SSX5O60225 188 aa11.41□□□□□ -0.58
USP11-204ENST00000377107 KISS1Q15726 138 aa11.41□□□□□ -0.58
USP11-204ENST00000377107 RABEPKQ7Z6M1 372 aa11.41□□□□□ -0.58
USP11-204ENST00000377107 NFAM1Q8NET5 270 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms