RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 A0A1W2PRS3 328 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 KIR3DP1A8MWS1 328 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 BET1O15155 118 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 IGHG1P01857 330 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 CD2P06729 351 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 ABOP16442 354 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 GNB3P16520 340 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 CAPZA1P52907 286 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 OC90Q02509 493 aaPredicted RBP8.43□□□□□ -1.06
TRIM39-202ENST00000376659 CHAF1BQ13112 559 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 BAMBIQ13145 260 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 HYAL4Q2M3T9 481 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 Q6ZPA2 131 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 LYG2Q86SG7 212 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 OR8S1Q8NH09 359 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 SPRY4Q9C004 299 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 SDK2Q58EX2 2172 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 C9orf170A2RU37 121 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 PMS2P1A4D2B8 440 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF823P16415 610 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 PPP1R1AQ13522 171 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF124Q15973 351 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF468Q5VIY5 522 aaPredicted RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 C1QL2Q7Z5L3 287 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 TRAPPC6BQ86SZ2 158 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 UEVLDQ8IX04 471 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 KCNRGQ8N5I3 272 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 OR5M9Q8NGP3 310 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 SCARB1Q8WTV0 552 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 LINC00052Q96N35 136 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 C12orf57Q99622 126 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 CMKLR1Q99788 373 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 CRB3Q9BUF7 120 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 SHARPINQ9H0F6 387 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 DECR2Q9NUI1 292 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 KLRF1Q9NZS2 232 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 A0A1W2PP11 408 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 SULT2B1O00204 365 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 RLN2P04090 185 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 CLDN15P56746 228 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 MC2RQ01718 297 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 MICBQ29980 383 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 DBX2Q6ZNG2 339 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 NAA40Q86UY6 237 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 PPP1R3BQ86XI6 285 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 IFI44Q8TCB0 444 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 NUDCD2Q8WVJ2 157 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 GUCD1Q96NT3 240 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF416Q9BWM5 594 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 C1QTNF6Q9BXI9 259 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 MYEF2Q9P2K5 600 aaKnown RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 ASCC3Q8N3C0 2202 aaKnown RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 LRRC3CA6NJW4 275 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF736B4DX44 427 aaPredicted RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 NUPL2O15504 423 aaKnown RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 SOCS1O15524 211 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 TBPP20226 339 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 HRH1P35367 487 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 CX3CR1P49238 355 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 GK2Q14410 553 aaPredicted RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 MEF2DQ14814 521 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 CDNFQ49AH0 187 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 RAB12Q6IQ22 244 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 LPCAT3Q6P1A2 487 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 TMPPEQ6ZT21 453 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 C20orf196Q8IYI0 205 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 MEIOBQ8N635 442 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 RBPMSQ93062 196 aaKnown RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM41AQ96HV5 264 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF385AQ96PM9 386 aaKnown RBP8.42□□□□□ -1.06
TRIM39-202ENST00000376659 C5orf66Q9H5L9 145 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 SLC39A1Q9NY26 324 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 ASH2LQ9UBL3 628 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 OSGIN2Q9Y236 505 aa8.42□□□□□ -1.06
TRIM39-202ENST00000376659 F8VVB4 439 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 F8VWA3 439 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 QDPRP09417 244 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 FKBP2P26885 142 aaKnown RBP8.41□□□□□ -1.06
TRIM39-202ENST00000376659 DNASE1L1P49184 302 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 MLF1P58340 268 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 BTN1A1Q13410 526 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 UBE2V2Q15819 145 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ABLIM2Q6H8Q1 611 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF627Q7L945 461 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 BPIFB2Q8N4F0 458 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF565Q8N9K5 539 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ZBTB44Q8NCP5 570 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM185AQ8NFB2 350 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 STEAP2Q8NFT2 490 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 MAFAQ8NHW3 353 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-202ENST00000376659 FBXO17Q96EF6 278 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF837Q96EG3 531 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-202ENST00000376659 FAM117AQ9C073 453 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 EIF1AYO14602 144 aaKnown RBP8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ST8SIA5O15466 376 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 SYT7O43581 403 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 HIST1H1DP16402 221 aaKnown RBP8.41□□□□□ -1.06
TRIM39-202ENST00000376659 RAB3AP20336 220 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 EIF1P41567 113 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms