RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 ATP1B3P54709 279 aa12.29□□□□□ -0.44
COL16A1-202ENST00000373668 DHRS2Q13268 280 aa12.29□□□□□ -0.44
COL16A1-202ENST00000373668 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL16A1-202ENST00000373668 ANKRD16Q6P6B7 361 aa12.29□□□□□ -0.44
COL16A1-202ENST00000373668 P4HA3Q7Z4N8 544 aa12.29□□□□□ -0.44
COL16A1-202ENST00000373668 LINC00518Q8N0U6 118 aa12.29□□□□□ -0.44
COL16A1-202ENST00000373668 GALNT16Q8N428 558 aa12.29□□□□□ -0.44
COL16A1-202ENST00000373668 OR13C3Q8NGS6 347 aa12.29□□□□□ -0.44
COL16A1-202ENST00000373668 PHB2Q99623 299 aa12.29□□□□□ -0.44
COL16A1-202ENST00000373668 IGKV3D-11A0A0A0MRZ8 115 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 C9orf172C9J069 976 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 BDKRB2P30411 391 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 SHEQ5VZ18 495 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 UNQ9370/PRO34162Q6UXP9 181 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 LINC00469Q8N7U9 141 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 DMRTA2Q96SC8 542 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 A0A096LPE4 126 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 A0A1W2PPZ6 126 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 RAMP1O60894 148 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ITGA5P08648 1049 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 RIDAP52758 137 aaKnown RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 PLAURQ03405 335 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 EXT1Q16394 746 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 CDCP2Q5VXM1 449 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 CNEP1R1Q8N9A8 125 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 FOXRED1Q96CU9 486 aaPredicted RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ALKBH3Q96Q83 286 aaPredicted RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 PARD6AQ9NPB6 346 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 TAS2R4Q9NYW5 299 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 FREM1Q5H8C1 2179 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 A0A0G2JMM0 328 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 A0A1W2PPB8 328 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 A0A1W2PRS3 328 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ZNF98A6NK75 572 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 KIR3DP1A8MWS1 328 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 EIF4E2O60573 245 aaKnown RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 HPP00738 406 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 CTLA4P16410 223 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 PAN3Q58A45 887 aaKnown RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 WDR38Q5JTN6 314 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ZNF585AQ6P3V2 769 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 KCTD18Q6PI47 426 aaPredicted RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 H1FNTQ75WM6 255 aaPredicted RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ATG4DQ86TL0 474 aaPredicted RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 SLC25A28Q96A46 364 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 SLC25A21Q9BQT8 299 aaPredicted RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 IER2Q9BTL4 223 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 PIGMQ9H3S5 423 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ZNF71Q9NQZ8 489 aaPredicted RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ZNF275Q9NSD4 429 aaPredicted RBP12.28□□□□□ -0.44
COL16A1-202ENST00000373668 ICAM5Q9UMF0 924 aa12.28□□□□□ -0.44
COL16A1-202ENST00000373668 TSPAN2O60636 221 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 RPA2P15927 270 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 HSF1Q00613 529 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 GLO1Q04760 184 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 EGR4Q05215 589 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 SMCO1Q147U7 214 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 SLC18B1Q6NT16 456 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 FAM219AQ8IW50 185 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 GCNT2Q8N0V5 402 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 OR5T2Q8NGG2 359 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 TMEM41AQ96HV5 264 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 EMC9Q9Y3B6 208 aa12.27□□□□□ -0.44
COL16A1-202ENST00000373668 RAB19A4D1S5 217 aa12.27□□□□□ -0.45
COL16A1-202ENST00000373668 ARPC3O15145 178 aa12.27□□□□□ -0.45
COL16A1-202ENST00000373668 LYPD3O95274 346 aa12.27□□□□□ -0.45
COL16A1-202ENST00000373668 FGF5P12034 268 aa12.27□□□□□ -0.45
COL16A1-202ENST00000373668 SNU13P55769 128 aaKnown RBP12.27□□□□□ -0.45
COL16A1-202ENST00000373668 CARD18P57730 90 aa12.27□□□□□ -0.45
COL16A1-202ENST00000373668 RBM39Q14498 530 aaKnown RBP12.27□□□□□ -0.45
COL16A1-202ENST00000373668 DCXRQ7Z4W1 244 aa12.27□□□□□ -0.45
COL16A1-202ENST00000373668 BIN3Q9NQY0 253 aa12.27□□□□□ -0.45
COL16A1-202ENST00000373668 A0A1W2PR80 420 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 OR4C45A6NMZ5 311 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 KLF7O75840 302 aaPredicted RBP12.26□□□□□ -0.45
COL16A1-202ENST00000373668 ITGB2P05107 769 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 GUCA2BQ16661 112 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 OR52W1Q6IF63 320 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 C11orf87Q6NUJ2 197 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 ACOT7LQ6ZUV0 252 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 SLC36A1Q7Z2H8 476 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 OR5D18Q8NGL1 313 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 NUDCD2Q8WVJ2 157 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 ZNF285Q96NJ3 590 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 TSPAN32Q96QS1 320 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 PLEK2Q9NYT0 353 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 ASH2LQ9UBL3 628 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 ZNF629Q9UEG4 869 aaPredicted RBP12.26□□□□□ -0.45
COL16A1-202ENST00000373668 WNT11O96014 354 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 SFTPBP07988 381 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 RFPL3SP0C7P2 107 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 PNLIPP16233 465 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 MST1P26927 711 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 SDHAP31040 664 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 ARFRP1Q13795 201 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 SLC9A3R2Q15599 337 aa12.26□□□□□ -0.45
COL16A1-202ENST00000373668 FAM76BQ5HYJ3 339 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms