RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SEC61A1P61619 476 aaKnown RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF766Q5HY98 468 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 OTPQ5XKR4 325 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF546Q86UE3 836 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC51BQ86UW2 128 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 CATSPERDQ86XM0 798 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF695Q8IW36 515 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 GALNT16Q8N428 558 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 TMEM229BQ8NBD8 167 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 DUSP18Q8NEJ0 188 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 CHAC2Q8WUX2 184 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 RNF133Q8WVZ7 376 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 DCUN1D4Q92564 292 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 DVL3Q92997 716 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 APOBEC3DQ96AK3 386 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 MARVELD1Q9BSK0 173 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 MIXL1Q9H2W2 232 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 OR51B6Q9H340 312 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 BANF2Q9H503 90 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 AUNIPQ9H7T9 357 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 NECAP2Q9NVZ3 263 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 C1orf123Q9NWV4 160 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 FBXL2Q9UKC9 423 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 SLCO1B1Q9Y6L6 691 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ASCC3Q8N3C0 2202 aaKnown RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 IGKV1D-42A0A075B6H8 117 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 KIR2DS1A0A191URI9 304 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF891A8MT65 544 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 SERPINE3A8MV23 424 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 RER1O15258 196 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 RRP8O43159 456 aaKnown RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 HYAL3O43820 417 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 SIX6O95475 246 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 RECKO95980 971 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 SERPINE2P07093 398 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 SP9P0CG40 484 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 PPP3CBP16298 524 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 KIR2DS4P43632 304 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 MFGE8Q08431 387 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 IKZF1Q13422 519 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 KIR2DS1Q14954 304 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ETFDHQ16134 617 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 OR2A2Q6IF42 318 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 LINC00114Q6XXX2 140 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 MAMSTRQ6ZN01 415 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 EXD3Q8N9H8 876 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 TCEAL3Q969E4 200 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 C10orf35Q96D05 121 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 UBL7Q96S82 380 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 RTL8AQ9BWD3 113 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 NGBQ9NPG2 151 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ASF1BQ9NVP2 202 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 DNAJB11Q9UBS4 358 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 MTFP1Q9UDX5 166 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 OR5H15A6NDH6 313 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 F8W036 122 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 GMDSO60547 372 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ACTL6AO96019 429 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 PDGFBP01127 241 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 IL5P05113 134 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 CTXN2P0C2S0 81 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 S100A11P31949 105 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 EIF2S3P41091 472 aaKnown RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 MEOX1P50221 254 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 FUT6P51993 359 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 BLOC1S1P78537 153 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 INSM1Q01101 510 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ROM1Q03395 351 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 HYAL4Q2M3T9 481 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 FAM76BQ5HYJ3 339 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 CLLU1Q5K131 121 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 C19orf48Q6RUI8 117 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 DEFB124Q8NES8 71 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ST8SIA2Q92186 375 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZC3HAV1LQ96H79 300 aaKnown RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 RNF170Q96K19 258 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 POLDIP2Q9Y2S7 368 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 SF3B6Q9Y3B4 125 aaKnown RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 HS3ST3B1Q9Y662 390 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 GBF1Q92538 1859 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 TOR1AO14656 332 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 CTAG2O75638 210 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 MPZL1O95297 269 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 TGM6O95932 706 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ACSM4P0C7M7 580 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 MGMTP16455 207 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ACP1P24666 158 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 RFC3P40938 356 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 GABRA4P48169 554 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 GSK3AP49840 483 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 AKR1C2P52895 323 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 SORDQ00796 357 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 TEX30Q5JUR7 227 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 DCAF10Q5QP82 559 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 B3GNTL1Q67FW5 361 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 C17orf107Q6ZR85 190 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF573Q86YE8 665 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 APCDD1LQ8NCL9 501 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 OR51F2Q8NH61 342 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 PAQR8Q8TEZ7 354 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms