RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CLDN1O95832 211 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 GDF1P27539 372 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 SRYQ05066 204 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 PRICKLE4Q2TBC4 344 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 MRM1Q6IN84 353 aaKnown RBP10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 CA14Q9ULX7 337 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMED3Q9Y3Q3 217 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 LMO7DNF2Z398 122 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 CXCL12P48061 93 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF611Q8N823 705 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 HIPK2Q9H2X6 1198 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 BANF2Q9H503 90 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 PLXND1Q9Y4D7 1925 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM272A0A1B0GTI8 110 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF705FA8MVS1 300 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF705DP0CH99 300 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF705BP0CI00 300 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 MRGPRX1Q96LB2 322 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 MDFIC2A0A1B0GVS7 189 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 YY2O15391 372 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 RELL2Q8NC24 303 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 SLC22A13Q9Y226 551 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF814B7Z6K7 855 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 SERPINA7P05543 415 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 PGA3P0DJD8 388 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 GNB3P16520 340 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 FAM181AQ8N9Y4 354 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 TP53I13Q8NBR0 393 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 CXorf58Q96LI9 332 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 TNFSF14O43557 240 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 GGTLC2Q14390 218 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 HYAL4Q2M3T9 481 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 WDR38Q5JTN6 314 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF813Q6ZN06 617 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 NAA40Q86UY6 237 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 IL22RA1Q8N6P7 574 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 EDEM2Q9BV94 578 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM31Q5JXX7 168 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR52B4Q8NGK2 314 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 KCNE4Q8WWG9 221 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 GPR160Q9UJ42 338 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 RNASEK-C17orf49H0YIS7 233 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 H7BYZ3 331 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 RAB27BO00194 218 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 NRASP01111 189 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF239Q16600 458 aaKnown RBP10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 C1orf53Q5VUE5 145 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 JMJD6Q6NYC1 403 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 TINAGL1Q9GZM7 467 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 PKDREJQ9NTG1 2253 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 PIGPP57054 158 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 ADAM5Q6NVV9 412 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 MOB1BQ7L9L4 216 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 ABI3BPQ7Z7G0 1075 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 LAMTOR5O43504 91 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 SMIM6P0DI80 62 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 FUT7Q11130 342 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 SFTA3P0C7M3 94 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM71Q6P5X7 295 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 RTN4IP1Q8WWV3 396 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 C10orf35Q96D05 121 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 LINC01387J3KSC0 135 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 SHHQ15465 462 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 CST9LP1Q5W188 147 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 FAM219BQ5XKK7 198 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 VN1R4Q7Z5H5 301 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR51F2Q8NH61 342 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 TRAPPC2LQ9UL33 140 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 PLSCR5A0PG75 271 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 GLAP06280 429 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 CTSFQ9UBX1 484 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM88Q6PEY1 159 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
CDC42BPA-202ENST00000366764 C20orf202A1L168 122 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 GABRA1P14867 456 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 SELEP16581 610 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 SHBQ15464 509 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 SHEQ5VZ18 495 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 HINT2Q9BX68 163 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 F6UZH7 168 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 QDPRP09417 244 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 ERGP11308 486 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 PPP2CBP62714 309 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 PPP2CAP67775 309 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 GCNT2Q8N0V5 402 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 MRPS24Q96EL2 167 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 LIN37Q96GY3 246 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 SCGB1D1O95968 90 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 OVCH2Q7RTZ1 564 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR5AP2Q8NGF4 316 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 SARGQ9BW04 601 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 MVDP53602 400 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 LAIR1Q6GTX8 287 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 NRSN2Q9GZP1 204 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 POLDIP2Q9Y2S7 368 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 LRP3O75074 770 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 HLA-DOBP13765 273 aa10.61□□□□□ -0.71
CDC42BPA-202ENST00000366764 LGALSLQ3ZCW2 172 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms