RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR52B2Q96RD2 323 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 PRR25Q96S07 402 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 ADAT1Q9BUB4 502 aaKnown RBP6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 FAM234AQ9H0X4 552 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 METTL8Q9H825 291 aaKnown RBP6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 RMND5AQ9H871 391 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 RAB18Q9NP72 206 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 ZIM2Q9NZV7 527 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 STX18Q9P2W9 335 aaKnown RBP6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 LGALS13Q9UHV8 139 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 ADAM18Q9Y3Q7 739 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 GMEB1Q9Y692 573 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 LHFPL6Q9Y693 200 aa6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
HMGB1P39-201ENST00000366304 TRAV27A0A087WT01 109 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 TRBV23-1A0A0A0MS06 115 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 TCRBV4S1A1TA0A5B7 111 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 CD300LBA8K4G0 201 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 M0R1W7 72 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 SERPINB7O75635 380 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 ZFPL1O95159 310 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 ACSM4P0C7M7 580 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 IDO1P14902 403 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 GPX2P18283 190 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 VSNL1P62760 191 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 CSNK2BP67870 215 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 IFFO1Q0D2I5 559 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 PIN1Q13526 163 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 SELPLGQ14242 412 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 NCR3LG1Q68D85 454 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 STUMQ69YW2 141 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 WDR93Q6P2C0 686 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 MKXQ8IYA7 352 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 C11orf42Q8N5U0 333 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 LRRC29Q8WV35 223 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 TMEM239Q8WW34 195 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 ACOT11Q8WXI4 607 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 H1FXQ92522 213 aaKnown RBP6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 DUS3LQ96G46 650 aaKnown RBP6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 Q96M85 177 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 ZNF583Q96ND8 569 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 WACQ9BTA9 647 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 HCAR1Q9BXC0 346 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 PPCSQ9HAB8 311 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 NKX1-2Q9UD57 310 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 TCF19Q9Y242 345 aa6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 COA3Q9Y2R0 106 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P39-201ENST00000366304 TEX13CA0A0J9YWL9 993 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 FAM90A8PA6NJQ4 464 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 A6NLC8 198 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 AHCYL1O43865 530 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 IGF2P01344 180 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 NR2C1P13056 603 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 RBM34P42696 430 aaKnown RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 GUCA1AP43080 201 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 VDAC2P45880 294 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 DGCR2P98153 550 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 ZNF92Q03936 586 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 SNAI3Q3KNW1 292 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 WDR82Q6UXN9 313 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 CFAP77Q6ZQR2 320 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 MEPCEQ7L2J0 689 aaKnown RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 SBSPONQ8IVN8 264 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 OR51A7Q8NH64 312 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 OR2AE1Q8NHA4 323 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 SPRYD4Q8WW59 207 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 LZICQ8WZA0 190 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 RSRC1Q96IZ7 334 aaKnown RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 RCHY1Q96PM5 261 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 GAFA1Q96PS6 74 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 COQ7Q99807 217 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 PRSS22Q9GZN4 317 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 WDR13Q9H1Z4 485 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 EVA1AQ9H8M9 152 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 VIPAS39Q9H9C1 493 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 SSU72Q9NP77 194 aaKnown RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 PNRC2Q9NPJ4 139 aaKnown RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 SNTG1Q9NSN8 517 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 ATPIF1Q9UII2 106 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 RIMS3Q9UJD0 308 aa6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 SF3B6Q9Y3B4 125 aaKnown RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 TSSC4Q9Y5U2 329 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P39-201ENST00000366304 hCG_1807616A0A1W2PRN6 198 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 PRSS37A4D1T9 235 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 A6NIZ1 184 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 F5H5K5 113 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 DCTN6O00399 190 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 BIRC5O15392 142 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 NDUFB3O43676 98 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 GMDSO60547 372 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC16A7O60669 478 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 KITP10721 976 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 MUC1P15941 1255 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 LUMP51884 338 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 GMFBP60983 142 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 RAP1BP61224 184 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 LSM6P62312 80 aaKnown RBP6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 RAP1AP62834 184 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms