RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 OR13C8Q8NGS7 320 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 CPNE4Q96A23 557 aaPredicted RBP12.46□□□□□ -0.42
COL6A1-201ENST00000361866 SDSLQ96GA7 329 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 NIPSNAP3BQ9BS92 247 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 FLVCR1Q9Y5Y0 555 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 SCN4AP35499 1836 aa12.46□□□□□ -0.42
COL6A1-201ENST00000361866 RER1O15258 196 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 NFYBP25208 207 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 LAP3P28838 519 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 FOXL2P58012 376 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 TESK1Q15569 626 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 RGS7BPQ6MZT1 257 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ZFP62Q8NB50 900 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 A0A0G2JMZ2 1700 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 A0A087WV48 116 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 A0A0G2JK05 382 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 TSTD3H0UI37 97 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 CTRB1P17538 263 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 COL9A1P20849 921 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 PIGPP57054 158 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 RAB11AP62491 216 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 RPL23AP62750 156 aaKnown RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 FABP9Q0Z7S8 132 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 BATFQ16520 125 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 NHLRC3Q5JS37 347 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 CTRB2Q6GPI1 263 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 RPUSD3Q6P087 351 aaKnown RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 LANCL3Q6ZV70 420 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 HINT2Q9BX68 163 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 UFSP2Q9NUQ7 469 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 UQCC1Q9NVA1 299 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 PTRH2Q9Y3E5 179 aaKnown RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 IGHV3-15A0A0B4J1V0 119 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 PPP1R2P9O14990 202 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ARG1P05089 322 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 BTCP35070 178 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 SHEQ5VZ18 495 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ATRAIDQ6UW56 229 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ADAD2Q8NCV1 583 aaKnown RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 NINJ1Q92982 152 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 KIRREL1Q96J84 757 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ARHGEF17Q96PE2 2063 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ZNF646O15015 1829 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 H3BP45 60 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 LINC01565O15544 149 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 P04436 131 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 CT45A8P0DMV1 189 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 CT45A9P0DMV2 189 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ABCD3P28288 659 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 C2orf68Q2NKX9 166 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 MIDNQ504T8 468 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 CT45A2Q5DJT8 189 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 MRPL21Q7Z2W9 205 aaKnown RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 OR51H1Q8NH63 302 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ZNRF4Q8WWF5 429 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 RTN4IP1Q8WWV3 396 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-201ENST00000361866 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 OR6C1Q96RD1 312 aa12.45□□□□□ -0.42
COL6A1-201ENST00000361866 IGHV3-64DA0A0J9YX35 117 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 CD300LBA8K4G0 201 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 SCRG1O75711 98 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 IFNA1P01562 189 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 CRYBA1P05813 215 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 HOXD4P09016 255 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-201ENST00000361866 IL9P15248 144 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 FOXF1Q12946 379 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 CNN3Q15417 329 aaKnown RBP12.44□□□□□ -0.42
COL6A1-201ENST00000361866 ZNF141Q15928 474 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 PUSL1Q8N0Z8 303 aaKnown RBP12.44□□□□□ -0.42
COL6A1-201ENST00000361866 EMG1Q92979 244 aaKnown RBP12.44□□□□□ -0.42
COL6A1-201ENST00000361866 CCNL2Q96S94 520 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-201ENST00000361866 AICDAQ9GZX7 198 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 TMEM74BQ9NUR3 256 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 GFOD1Q9NXC2 390 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 MFSD2BA6NFX1 497 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 FOLR1P15328 257 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
COL6A1-201ENST00000361866 SLC16A14Q7RTX9 510 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 CDC20BQ86Y33 519 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 LGI3Q8N145 548 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 SLC25A31Q9H0C2 315 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 A0A087WZY1 265 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 ZNF217O75362 1048 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 CRHP06850 196 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 SPP1P10451 314 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 DOK3Q7L591 496 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 MRGPREQ86SM8 312 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 MITD1Q8WV92 249 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 MRPL22Q9NWU5 206 aaKnown RBP12.44□□□□□ -0.42
COL6A1-201ENST00000361866 SRPK3Q9UPE1 567 aa12.44□□□□□ -0.42
COL6A1-201ENST00000361866 IGHV5-51A0A0C4DH38 117 aa12.43□□□□□ -0.42
COL6A1-201ENST00000361866 ZNF705FA8MVS1 300 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-201ENST00000361866 SOCS1O15524 211 aa12.43□□□□□ -0.42
COL6A1-201ENST00000361866 CST7O76096 145 aa12.43□□□□□ -0.42
COL6A1-201ENST00000361866 BPNT1O95861 308 aa12.43□□□□□ -0.42
COL6A1-201ENST00000361866 GP1BAP07359 652 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms