RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 GSX2Q9BZM3 304 aa8.77□□□□□ -1
CUX1-203ENST00000360264 C11orf54Q9H0W9 315 aaPredicted RBP8.77□□□□□ -1
CUX1-203ENST00000360264 A0A0U1RQS6 177 aa8.77□□□□□ -1
CUX1-203ENST00000360264 F10P00742 488 aa8.77□□□□□ -1
CUX1-203ENST00000360264 CASP3P42574 277 aa8.77□□□□□ -1
CUX1-203ENST00000360264 SMN1Q16637 294 aaKnown RBP8.77□□□□□ -1
CUX1-203ENST00000360264 RAB40CQ96S21 281 aa8.77□□□□□ -1
CUX1-203ENST00000360264 A0A1W2PPC4 97 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 NRG2O14511 850 aaPredicted RBP8.77□□□□□ -1.01
CUX1-203ENST00000360264 MEOX1P50221 254 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.77□□□□□ -1.01
CUX1-203ENST00000360264 TAPBPO15533 448 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 OR4Q3Q8NH05 313 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 GRAMD2BQ96HH9 432 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 HRH3Q9Y5N1 445 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 K7EQS6 105 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 DNASE2O00115 360 aaPredicted RBP8.77□□□□□ -1.01
CUX1-203ENST00000360264 FCER1GP30273 86 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 OR5H6Q8NGV6 325 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 LKAAEAR1Q8TD35 194 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 OIT3Q8WWZ8 545 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 LHX4Q969G2 390 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 FUT3P21217 361 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 TPPP2P59282 170 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 BEX5Q5H9J7 111 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 UQCC2Q9BRT2 126 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 MARCH5Q9NX47 278 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 JUNBP17275 347 aaPredicted RBP8.77□□□□□ -1.01
CUX1-203ENST00000360264 EPHA2P29317 976 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 GPM6AP51674 278 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 FA2HQ7L5A8 372 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 OR2M3Q8NG83 312 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 GPBAR1Q8TDU6 330 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 CDCA4Q9BXL8 241 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 AMBRA1Q9C0C7 1298 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 TMEM235A6NFC5 223 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 ZBTB42B2RXF5 422 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 ZNF385BQ569K4 471 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 NANOGP1Q8N7R0 232 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 MS4A6EQ96DS6 147 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 PDXPQ96GD0 296 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 LOC102723971A0A1B0GUV8 181 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 ICOSLGO75144 302 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 OR2J2O76002 312 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 ZGLP1P0C6A0 271 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 B4GALT1P15291 398 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 HERVK_113P61574 105 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 ARIH2OSQ8N7S6 290 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 RPEQ96AT9 228 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 OR51B4Q9Y5P0 310 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 ERVFC1-1P60608 527 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 HFEQ30201 348 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 C16orf52Q8NHV5 167 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 TMEM208Q9BTX3 173 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 PRR14LQ5THK1 2151 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 HAAOP46952 286 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 ID4P47928 161 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 BTG2P78543 158 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 GFRALQ6UXV0 394 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 Q6ZSR9 355 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 OR10Z1Q8NGY1 313 aa8.77□□□□□ -1.01
CUX1-203ENST00000360264 PPP1CBP62140 327 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 FAM24AA6NFZ4 105 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 NPPBP16860 134 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 PTTG1IPP53801 180 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 PELI3Q8N2H9 469 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 RBPMSQ93062 196 aaKnown RBP8.76□□□□□ -1.01
CUX1-203ENST00000360264 RAB18Q9NP72 206 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 TRAV1-2A0A0B4J238 106 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 ZNF724A8MTY0 619 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 OXA1LQ15070 435 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 TEX29Q8N6K0 151 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 OR5M1Q8NGP8 315 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 LRFN3Q9BTN0 628 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 THBS4P35443 961 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 OR2B8PP59922 312 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 NOL4LQ96MY1 436 aaPredicted RBP8.76□□□□□ -1.01
CUX1-203ENST00000360264 PSENENQ9NZ42 101 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 USP54Q70EL1 1684 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 ANKUB1A6NFN9 424 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 PTGER1P34995 402 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 HOXA4Q00056 320 aaPredicted RBP8.76□□□□□ -1.01
CUX1-203ENST00000360264 HAGHQ16775 308 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 TBPL2Q6SJ96 375 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 OR2W3Q7Z3T1 314 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 CARFQ8N187 725 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 RAB1BQ9H0U4 201 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 MGMTP16455 207 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 PRRX1P54821 245 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 FUT7Q11130 342 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 TOX3O15405 576 aaPredicted RBP8.76□□□□□ -1.01
CUX1-203ENST00000360264 FZD6O60353 706 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 SP1P08047 785 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 GUSBP08236 651 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 ACKR1Q16570 336 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 ZFP62Q8NB50 900 aaPredicted RBP8.76□□□□□ -1.01
CUX1-203ENST00000360264 PP6455Q8WZ26 134 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 CYHR1Q6ZMK1 362 aa8.76□□□□□ -1.01
CUX1-203ENST00000360264 SRRQ9GZT4 340 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms